Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01306 ATGGGATGCATGTGTTGCAAGCCTTCTGCCATTGAGGATAGTAAGGAGAGTCCAAGGGAACGATTATCAAACAAGGCTGTGTTGGAATCACGTGTATCTAGGGGAGCTTCATCAAGGAGGGAGGAAGCATATAGGTTGGTAAAGGATAGGTATGATAACAATGATGGGAGGACTGCATTGATTGATAAGCAAGGGCAAGGGAATGGCTCGGTTCGAGTGCAAGGTGATAATAATTTTGAAAGGAAGAGGGAGAAAATGGAATATGCTGTTGTTCAACATCCAGCGATTGGTAGTGTTCCTAAAGCCATGGAAGGGGAGCAGGTTGCAGCTGGATGGCCCTCATGGCTTGCAGCAGTGGCTGGAGAGGCTATCAAAGGATGGCTGCCACGTCGTGCGGATTCTTTTGAGAAGTTGGATAAAATTGGCCAGGGAACTTACAGTAATGTTTATAGAGCTCGTGATCTTGAACAAAAAAAGATTGTTGCTTTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGCTTCATGGCAAGGGAAATTCACATTCTGCGTAGGCTTGATCATCCAAATGTCATAAAACTGGAAGGCTTGGTTACATCAAGGATGTCGTGCAGCTTATACCTTGTTTTTGAGTACATGGAACATGATTTGGCTGGGCTTGCATCACATCCTGGACTGAAGTTTACAGAAGCACAGGTTAAATGTTACATGCAGCAACTTTTACGTGGACTTGATCACTGCCACAGCCGTGGTGTACTGCACCGTGACATTAAGGGTTCCAATCTTTTGATTGACAACAATGGAATCTTAAAAATTGCAGACTTTGGTTTGGCAAGCTTTTTTGATCCCAATCAAATTCAGCCACTGACAAGCCGAGTTGTCACTCTTTGGTATAGGCCACCAGAGCTTTTACTCGGAGCTACTTATTATGGCACTGCTGTAGATTTATGGAGCACAGGTTGCATACTTGCTGAGCTTTATGCTGGCAAGCCTATAATGCCTGGTAGAACTGAGGTGGAGCAATTACATAAAATTTTTAAACTTTGTGGTTCACCTTCTGAGGACTATTGGAGAAAATCGAAATTGCCTCATGCAACAATATTTAAGCCTCAACAACCTTACAGGCGTTGTGTTGCTGAAACATTCAAGGACTTTCCTGCACCTGCAATAGAACTGATAGAGACCCTTTTGTCCATAGATCCTGCTGATCGTGGAACTTCAGCATCTGCTTTGAAGAGTGAGTTCTTCTCCACGAAACCTCAACCTTGTGATCCTTCAAGCTTGCCGAAATATCCTCCCAGCAAAGAATTTGACGCTAAAGTACGGGATGAAGAAGCTAGAAGACAAGGAGCAGCAGGAAAGGGTCAGAGACATGATCCTGAGAGAAGAGGAGTAAGAGAATCTCGAGCTGTTCCTGCACCTGATGCCAATGCTGAACTGGTCTTGTCAATGCAGAAGAGACAAGGGCCGACTAATTCTCAAAGCAGGAGTGAGAAGTTTAACCCTCATCCTGAAGAAGCTGCTTCTGGATTTCCCATTGATCCCCCTAGACCATCACAAGCTGTAGAAGTAAGTGCGGATCCCCAAGTACATCAACATAAAAGAGCCTCCCATTCAGGTCCACTGACTCACCGTGCTGCATGGGCTAAAGCTGGGAAGAACCAGGATGATGCTCCAAAGATTTCAATGGGGGGTGACTTATCAACAATCTCAGGCTTAGTAGCAGCCAGGAGGAGTATGTTGTCTGACGATCGCAGAGAAAGGTCTGGATCATCACAAGCAGAGGCTTCAAAACTAATTACCAGGTTCCCAGGATCCTTCAAGGAGGCCTCTGAATCATTGATGCAACAGGATCAGAAGCATCAAGTACATGCTCCTCAAAAGGAAGAAGGAAGAGGCAGCAACAAAGACCCAAATCCTGTTGGTTATGGATCCAAGGGTTATAAAATTCATTATTCTGGTCCATTGCTATCAAGCAACATGGATCAGATGTTTAAAGACCATGATCGCCAAATTCAGGAGGCAGTTAGAAGAGCACGTTTGGACAAGGCAAAGATGAGAAGACTTCAAGCCGAGGGGAACCAGATAACCAATTCATTATTTGTTTCTGGTCGTTGA 2127 0.4462 MGCMCCKPSAIEDSKESPRERLSNKAVLESRVSRGASSRREEAYRLVKDRYDNNDGRTALIDKQGQGNGSVRVQGDNNFERKREKMEYAVVQHPAIGSVPKAMEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNQIQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYRRCVAETFKDFPAPAIELIETLLSIDPADRGTSASALKSEFFSTKPQPCDPSSLPKYPPSKEFDAKVRDEEARRQGAAGKGQRHDPERRGVRESRAVPAPDANAELVLSMQKRQGPTNSQSRSEKFNPHPEEAASGFPIDPPRPSQAVEVSADPQVHQHKRASHSGPLTHRAAWAKAGKNQDDAPKISMGGDLSTISGLVAARRSMLSDDRRERSGSSQAEASKLITRFPGSFKEASESLMQQDQKHQVHAPQKEEGRGSNKDPNPVGYGSKGYKIHYSGPLLSSNMDQMFKDHDRQIQEAVRRARLDKAKMRRLQAEGNQITNSLFVSGR* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01306 708 Gene3D Transferase(Phosphotransferase) domain 1 218 457 - -
Rops7g01306 708 PANTHER CELL DIVISION PROTEIN KINASE 133 425 - -
Rops7g01306 708 Gene3D Phosphorylase Kinase; domain 1 122 217 - -
Rops7g01306 708 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Rops7g01306 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Rops7g01306 708 CDD STKc_CDK9_like 135 419 - -
Rops7g01306 708 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Rops7g01306 708 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01306 708 SUPERFAMILY Protein kinase-like (PK-like) 129 426 IPR011009 -
Rops7g01306 708 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01306 708 Pfam Protein kinase domain 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01306 708 MobiDBLite consensus disorder prediction 438 472 - -
Rops7g01306 708 MobiDBLite consensus disorder prediction 607 649 - -
Rops7g01306 708 Coils Coil 675 695 - -
Rops7g01306 708 MobiDBLite consensus disorder prediction 418 569 - -
Rops7g01306 708 FunFam probable serine/threonine-protein kinase At1g54610 218 459 - -
Rops7g01306 708 MobiDBLite consensus disorder prediction 10 39 - -
Rops7g01306 708 MobiDBLite consensus disorder prediction 487 501 - -
Rops7g01306 708 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01306 Rops-Chr7 17795173 17802147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01306 127 460 Core Cell Cycle Gene Families AT5G10270 53.143 1.61e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Rops7g01306 Pkinase 7.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01306 - - gmx:100792173 1300.8