Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01297 ATGGAAGCTCTTCACACACATTCACACGTAATACCCCTCGCGTTTTACACGCTTTTTCGTGCATCATCACTACAACGTTTTCTTTCATGCTCTCAAGCCTACATATTCTACGTTGGTGGCAAAGATGGGTGGGTTTTGAACCCTTATGAGAATTATAATCAATGGGCTGAAAGGAACAGGTTTCAAGTCAGTGACACTCTTGTTTTTAAGTACAAGAAGGGTTCAAACTCGGTGTTGGTGGTGAACAAGGATGATTATGAGAAATGCAACAAGAAGAACCCGATCATGAAGTTGGAAGATGGTGACTCTGAGTTCAAGTTTGATCGATCGGGTCCTTTTTACTTCATCAGTGGCAAAGATGAGAATTGTGAGAAAGGTCAGAAATTGATCATTGTGGTGTTGGCTGTTAGAGAACAAAAGCCTCCTTATTATGTTCCAACACCTCCACAAACTCCTTATGTTCCAACACCTCCACAAACTCCTTCTCCCTATGTTCCTACTCCACCAAAAGCTCCATCCCCTGGTAATCATCCTCCCTATGTTCCAACACCTCCAAAGACTCCTTCTCCCTATGTCCCTACTCCTCCAAAAGCTCCTTCACCTATTCATCATCCACCCTATGTTCCAATACCTCCAAAGACTCCCTCTCCTGTCTATAGTCCTCCTCCCAATGTTCCTACCCCTCCAAAAGCTCCATCCCCTGGCAATCACCCTCCATATGTTCCAATTCCTCCAAAAACTCCCTCTCCCATTTCTCAGCCTCCATATGTTCCAACACCTCCAAAAACTCCTTCCCCTGGCAATCAACCTCCATATGTTCCAACTCCTCCAAAAACCCCTTCTCCTATTTCCCAGCCTCCTTATGTTCCAACACCTCCTCAAGCTCCTTCCCCTGGCAGCAATCAACCTCCATATGTTCCAACTCCTCCAAAAACCCCTTCTCCTATCTCCCAACCTCCATATGTACCAACACCTCCAAAAACCCCTTCTCCCATTTCTCAACCTCCATATGTACCAACACCTCCAAAAACTCCCTCTCCCATTTCTCAACCTCCATATGTTCCAACACCTCCAAACACTCCTTCACCAACATCTCAGCCACCCTACACTCCAACACCTCCAAACACTCCTTCTCCAGGTTCTCGACCACCCCATCTCCCAACTCCTCCAAAATCTTCTTCCCCCATCCCTCAGCCCCCATCTCCACTAACACCAATATCTCCATATCCATCCACCTACCCTCCTTCAACATCTCAGCCACCTTCAGTTTCCTCTGCACCTCTGGCGAGTCCTCCGGTGCCGGCCACGACTTCACCTCCATCCTCGTCCCCATCAGCCATCACTCCTGCAGCATCTACTCCGGCGTCACTTCCGGCAGCAACAACTCCTTCACCGTCAGGTTCATCATCATCCACACCACCGACGTCTTCGAATGAAACGGCACCAGCCCGGCCAAACGGGGTGTCGCCTATGACACCCTCAGTGTTATCGGTGTATTCCGTCACCATTTTGGTCGCTACTGCTCTCACCATTGCTCTTGGCTAG 1545 0.4854 MEALHTHSHVIPLAFYTLFRASSLQRFLSCSQAYIFYVGGKDGWVLNPYENYNQWAERNRFQVSDTLVFKYKKGSNSVLVVNKDDYEKCNKKNPIMKLEDGDSEFKFDRSGPFYFISGKDENCEKGQKLIIVVLAVREQKPPYYVPTPPQTPYVPTPPQTPSPYVPTPPKAPSPGNHPPYVPTPPKTPSPYVPTPPKAPSPIHHPPYVPIPPKTPSPVYSPPPNVPTPPKAPSPGNHPPYVPIPPKTPSPISQPPYVPTPPKTPSPGNQPPYVPTPPKTPSPISQPPYVPTPPQAPSPGSNQPPYVPTPPKTPSPISQPPYVPTPPKTPSPISQPPYVPTPPKTPSPISQPPYVPTPPNTPSPTSQPPYTPTPPNTPSPGSRPPHLPTPPKSSSPIPQPPSPLTPISPYPSTYPPSTSQPPSVSSAPLASPPVPATTSPPSSSPSAITPAASTPASLPAATTPSPSGSSSSTPPTSSNETAPARPNGVSPMTPSVLSVYSVTILVATALTIALG* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01297 514 Gene3D - 33 137 IPR008972 -
Rops7g01297 514 FunFam Early nodulin-like protein 1 33 138 - -
Rops7g01297 514 ProSiteProfiles Phytocyanin domain profile. 34 135 IPR003245 GO:0009055
Rops7g01297 514 PANTHER BLUE COPPER PROTEIN 34 201 IPR039391 GO:0009055
Rops7g01297 514 MobiDBLite consensus disorder prediction 440 493 - -
Rops7g01297 514 CDD OsENODL1_like 34 134 IPR041846 -
Rops7g01297 514 PRINTS Proline rich extensin signature 181 193 - -
Rops7g01297 514 PRINTS Proline rich extensin signature 194 215 - -
Rops7g01297 514 PRINTS Proline rich extensin signature 158 174 - -
Rops7g01297 514 PRINTS Proline rich extensin signature 140 152 - -
Rops7g01297 514 MobiDBLite consensus disorder prediction 144 439 - -
Rops7g01297 514 Pfam Plastocyanin-like domain 44 127 IPR003245 GO:0009055
Rops7g01297 514 SUPERFAMILY Cupredoxins 33 134 IPR008972 -
Rops7g01297 514 MobiDBLite consensus disorder prediction 144 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01297 Rops-Chr7 17632428 17634519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01297 15 157 Phytocyanin Superfamily AT4G27520 50.350 4.98e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01297 - - gmx:100811987 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01297 7 17632428 17634519 Rops7g01297 7 17632428 17634519 ECH