Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01292 ATGGCTGCCAGAGAAATCATTCATAAGATGAAGGAAAAAGTTGGGTTTGGTTCATCAGACTCTGATTCAGGGAAAGGAAAGAGCAAGATGTCGAAGAACATAACTCATGGCTTTCACTTGGTAAAGGGAAGATCATATCATGCCATGGAAGATTATGTTGTTGCTCAATTTAAGCAAATTGATAACAATGAATTGGGTTTGTTTGCAATATTTGATGGCCATGCGGGTCACAATGTTCCTAACTACCTGCGGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGACTTCTGGAAAGAACCTGCAAATGCTGTCAACAGAGCATATAGTAAAACTGATTCTAATATTTTAGAGAAATCAGGTGAATTGGGTAGAGGGGGTTCAACCGCAGTTACAGCAATATTGATCAATTGTCAGAAGTTAGTAGTAGCCAATATTGGGGATTCTCGGGCTGTCTTATGCAAGAAAGGTGTAGCCAAACAACTATCAGTGGATCATGAGCCAATCACAGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCAAGATTTCCAGGGGATGTTCCACGGGTTGATGGACGGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCTTGAAGAAACACTTGAGTTCAGAGCCATATGTGACAGTGGAGGTGATAAAGGATGATGCAGATTTCATGATATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGAAGCAGTTGATTGCATCAGAGATGTAAAGGATGCTCGGTCTTCAGCAAAGCGCCTTACTGAAGAAGCACTTAACAGGAAAAGCACGGATGATATCTCCTGCATTGTTGTGAAATTTCAATGA 852 0.4014 MAAREIIHKMKEKVGFGSSDSDSGKGKSKMSKNITHGFHLVKGRSYHAMEDYVVAQFKQIDNNELGLFAIFDGHAGHNVPNYLRSHLFDNILKEPDFWKEPANAVNRAYSKTDSNILEKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLCKKGVAKQLSVDHEPITEHEDIKNRGGFVSRFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPYVTVEVIKDDADFMILASDGLWKVMSNQEAVDCIRDVKDARSSAKRLTEEALNRKSTDDISCIVVKFQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01292 283 PANTHER PROTEIN PHOSPHATASE 28 282 IPR015655 GO:0004722|GO:0006470
Rops7g01292 283 Gene3D - 30 283 IPR036457 -
Rops7g01292 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Rops7g01292 283 SMART PP2C_4 25 280 IPR001932 -
Rops7g01292 283 CDD PP2Cc 42 282 IPR001932 -
Rops7g01292 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Rops7g01292 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Rops7g01292 283 ProSitePatterns PPM-type phosphatase domain signature. 67 75 IPR000222 GO:0043169
Rops7g01292 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01292 Rops-Chr7 17549977 17554038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01292 1 283 PP2C-type Phosphatase Gene Family AT3G15260 73.010 8.23e-160 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01292 K17506 - gmx:100500617 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01292 7 17549977 17554038 Rops7g01292 7 17549977 17554038 ECH