Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01289 ATGGATGATCTAGCAAGTCTAGTTGAGGCAACAGGTTCAAGATTCACTTCATTGGAGCTTATTGGGCAGGGATCATTTGGAGATGTCTATAAAGGGTTTGACAAGGAGCTCAACAAAGCAGTTGCCATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAAATTGAGGATATTCAGAAGGAAATTGCTGTTCTGTCACAATGTCGATGTCCATACATTACCGAGTATTATGGTTCCTTTCTCAATCAAACTAAACTCTGGATAATAATGGAATACATGGCCGGCGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCCCTTGATGAAATGTCAATTGCTTGCATTCTTCGTGACTTGCTGCATGCTATTGATTACCTACATAGTGAAGGAAAAATTCACAGAGACATTAAAGCTGCAAACATTTTATTGAGTGAAAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATCCAGAATTCAGATGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACTGCAATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCACCCCATGAGAGTGCTTTTCATCATACCCCGAGAGAATCCTCCACAGCTAGATGAGCATTTTTCTCGTCCATTAAAAGAATTTGTTTCATTGTGTTTGAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAAGACCGCTTTATTCGCAATGCTAGGAAGAGTTCAAAGCTTATGGAAAGAATAAGGGAGCGTCCAAATCCAAAGTACCAAATAAAGGAAGATCCGGGGACACCTAGAAATGGCCCAAGAGGGAGAGGGGAGGCATCGGATACTATGAAGGTGCCAAGAGACATAAGGGGTGAAGAAACTAATCGACCCAGCGACCAGGGTAAAACCATGAAAAGTGCTGGATGGGACTTCAGCATTGGTGGATCTCAGGGTACTGGAACCTTTCGTACTGTTTCACGACCACCTCAGTTTAGAGATAAGAAAACTGAAGTTTCAAATAATCAGCTTACCCAAAGAAAAGCTCCAGAGGGTGGCTATCAAGGGGGATCTACCATTAGAAGTGCCCGTAATGACTCATTAGAAAGTTCCTTTGGAAAAGATCACAGAGTTCCTAACCATGATGGGCATCCAGATAATCACCTTGAAGATGATGAGTTATCTGGGAATGAATCAGGAACTGTTGTTATTCGATCTCCAAAAGGGTCAAGGCCGTCTGTATTTCGTGAGCAGAGCTCCCAGTCTAGCAGCAGCTACGCTTCTTTTGAAGATACTTCTACGAGTGGAACTGTTGTTTTACGTAGCCAGCATGATGATTCTGATTCTCCACAGACGCCGAGGTCCCGATGGGGACTTCATGACAGAAATTCAAATACCTCACTGGAAGATAGTGCCACAAACCTTGCTGAGGCAAAAGCTGTTATCCAAGCAGGGCTAAGGAAAGGGAATGCTCGAGAGAGATTTGCTCGGGGAAAAAACAACAATGATACACAGGAAAACAAGAGAGATCAAATGACTAGCAGCTCTGATTTTTCGAGACCTCATCGTGAACACAATGATGCACAAAAGGGCATGTTAAGATCGCATCATGCCATTGATGATGAAGAAAGTGCTAAAATAATATCATCATCGGTGCCATTATCAGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGAAGGGTCAATGGCACGAGCAGTTATCAATTCATTCATAAACATGGAGAGCACAAAGCCTAGATCCTGTGATGTTCTTGTCAAAAAATTGCTTCAGCGGTTGGCAAGTTCAAAAGAAGATTCATTGAAGGACCTGCAGGGACTGGCAGTCCAACTATTCAGCAAGACCAAGTCAGCCGAAGAAACCCGAAATGCAGAAACCGATAACCGGAAGAAACAACAGAACAAGGAACTTCATCCAAATAGCAATTTAAGCCCACTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTAAACCAATCTTGA 2112 0.4309 MDDLASLVEATGSRFTSLELIGQGSFGDVYKGFDKELNKAVAIKVIDLEESEDEIEDIQKEIAVLSQCRCPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPLKEFVSLCLKKVPAERPSAKELLKDRFIRNARKSSKLMERIRERPNPKYQIKEDPGTPRNGPRGRGEASDTMKVPRDIRGEETNRPSDQGKTMKSAGWDFSIGGSQGTGTFRTVSRPPQFRDKKTEVSNNQLTQRKAPEGGYQGGSTIRSARNDSLESSFGKDHRVPNHDGHPDNHLEDDELSGNESGTVVIRSPKGSRPSVFREQSSQSSSSYASFEDTSTSGTVVLRSQHDDSDSPQTPRSRWGLHDRNSNTSLEDSATNLAEAKAVIQAGLRKGNARERFARGKNNNDTQENKRDQMTSSSDFSRPHREHNDAQKGMLRSHHAIDDEESAKIISSSVPLSVLLIPSLKEAIADDPEGSMARAVINSFINMESTKPRSCDVLVKKLLQRLASSKEDSLKDLQGLAVQLFSKTKSAEETRNAETDNRKKQQNKELHPNSNLSPLARFLLSRWQGQTSRDLNQS* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01289 703 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01289 703 SUPERFAMILY Protein kinase-like (PK-like) 13 295 IPR011009 -
Rops7g01289 703 Gene3D Transferase(Phosphotransferase) domain 1 12 299 - -
Rops7g01289 703 MobiDBLite consensus disorder prediction 338 354 - -
Rops7g01289 703 MobiDBLite consensus disorder prediction 517 533 - -
Rops7g01289 703 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01289 703 FunFam serine/threonine-protein kinase dst1 isoform X1 12 302 - -
Rops7g01289 703 MobiDBLite consensus disorder prediction 656 674 - -
Rops7g01289 703 MobiDBLite consensus disorder prediction 395 422 - -
Rops7g01289 703 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 651 - -
Rops7g01289 703 MobiDBLite consensus disorder prediction 653 682 - -
Rops7g01289 703 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01289 703 MobiDBLite consensus disorder prediction 426 497 - -
Rops7g01289 703 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Rops7g01289 703 MobiDBLite consensus disorder prediction 273 497 - -
Rops7g01289 703 Coils Coil 41 68 - -
Rops7g01289 703 CDD STKc_MST3_like 13 287 - -
Rops7g01289 703 MobiDBLite consensus disorder prediction 515 560 - -
Rops7g01289 703 MobiDBLite consensus disorder prediction 308 327 - -
Rops7g01289 703 MobiDBLite consensus disorder prediction 273 289 - -
Rops7g01289 703 MobiDBLite consensus disorder prediction 540 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01289 Rops-Chr7 17479887 17493261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01289 1 700 MAP Kinase Kinase Kinase Kinase AT3G15220 64.957 0.0 864
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Rops7g01289 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01289 K08838 - gmx:100815042 1171.38