Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01272 ATGAAGAAACCGAAGCAAACCCAGCTGAACCCCAACTGGGTTCAACTCCAACAAAAGCTGAATGTCTCAAAGGTTTCAAGGACCTTAAAAAACTCAGAAGAAAACATCCCGCAATCAATATTGGGGAAACGTAAAGAGAGGCCAGATGATGAATCCAATGATTGTCAGATTAATCCTCTAATTCCCGTGAATGACGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTTGGCGTTGGTCAAGGAAACAAAAGTGCCCTTGGAAGAATAACACTGGTTAATAAGTGGGGAAACGTTATTTATGACGAGTTTGTACGGCCGATTGAGCGGGTTGTTGACTTCCGCACTAAAATTAGTGGCATAAGACCCCGGGATTTGAGAAAAGCAAAGGATTTTTGGACTGCTCAGAAGAAAGTAGCAGAGTTGATCAAAGGAAGGATCCTTGTGGGTCATGCCTTGTCCAATGATCTTAAGGCATTATTATTAAGTCATCCCAAAAAGGACATACGAGATACCTCCGAGTACCAACCATTTCTAAAGTCAAATAGCAGAATAGCATTGCGGCATCTTGCTGCTGAACATCTTGGTGTTAAGATCCAAACAGGAGAGCACTGCCCGATAGAAGATGCCCGTGCTGCCATGCTGCTTTACCAAAGAAATAGAAAAGAATGGGAGAAGAGCATGAAAGATCAATTTCGTCTCAAACAGAAGCTAAGGAAACGGAAGCAGAAAAAGAAGCAAAAGAATGAAGATGCTCCAAATGCCAACCACTCTGGAATTGAATCATAG 798 0.4248 MKKPKQTQLNPNWVQLQQKLNVSKVSRTLKNSEENIPQSILGKRKERPDDESNDCQINPLIPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRITLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKAKDFWTAQKKVAELIKGRILVGHALSNDLKALLLSHPKKDIRDTSEYQPFLKSNSRIALRHLAAEHLGVKIQTGEHCPIEDARAAMLLYQRNRKEWEKSMKDQFRLKQKLRKRKQKKKQKNEDAPNANHSGIES* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01272 265 SUPERFAMILY Ribonuclease H-like 72 221 IPR012337 -
Rops7g01272 265 Gene3D - 68 249 IPR036397 GO:0003676
Rops7g01272 265 SMART exoiiiendus 71 229 IPR013520 -
Rops7g01272 265 MobiDBLite consensus disorder prediction 39 53 - -
Rops7g01272 265 Coils Coil 210 230 - -
Rops7g01272 265 CDD REX4_like 73 221 IPR037431 GO:0006364|GO:0008408
Rops7g01272 265 MobiDBLite consensus disorder prediction 33 53 - -
Rops7g01272 265 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 35 244 IPR047021 GO:0004527
Rops7g01272 265 FunFam Interferon-stimulated exonuclease gene 20 68 239 - -
Rops7g01272 265 Pfam Exonuclease 73 220 IPR013520 -
Rops7g01272 265 MobiDBLite consensus disorder prediction 229 265 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01272 72 226 C2H2 Transcription Factor Family AT5G40310 36.842 5.68e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01272 K18327 - gmx:100819122 439.884