Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01269 ATGGCACAGTTACCTCCTAAAATACCAAACATATCCCAAAATTGGCCATCTTTTCCTCACCAAAGGGTACCCACGATGGCAAACTCTACCTCCCCAAATTCAACTATTGTGACGGCCACCGCACCGTCGCAAAACCACCAACAACAACAACAACACAATTTGCCCTCATGGATCGACGAGTTCCTCGACTTCTCGTCGGCACGGCGGGGAGCTCACCGGCGGTCGGCGAGTGACTCCATTGCTTTTCTTGAAACGCCATTTCTTGAAGAATGTCGTTCTGGGTTCGATAGGTTGGACGATGACCAACTCATTTCCATGTTCTCCGATGATGTCGCCGCCGTTTCACTGCCTCCGGCGGCGCCGTCGTCAATCTCCAATCCCTCCTCGCCGTCCTCCGACCAAAACAGTAACAACAATGATGAGAAGTCAATGGCAATGGCGTTGGATGGTGTACCCTTGAAGCCAAAGAATGAAGCCTTTGAAGATGAAAACTCGTGCAAGAATGAGGCGCCGCCGTCGTTACCCTCCTCCGCCGCCACCACTGTCACCTGCACTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAATCGGCAATCAGCTCAGAGGTCAAGAGTGAGAAAGCTACAATACATTTCTGAGCTTGAAAGGAGCGTAACAACTTTGCAGACGGAGGTTTCAGCATTGTCACCACGAGTTGCATTCTTGGACCATCAACGTTTGATTCTTAATGTCGACAACAGTGCCTTGAAGCAACGAATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAAGCATTAAAGAAGGAAATAGAAAGACTGAGGCAAATCTATCACCAACAGAACCTACAAAAGATGGGTAACTCAGTCAACATCAATGGCCATTCTCTTCAATCTCCACCAACATCACAGCCACAACCACCACTGCAACCACACTCTCTCCATCAATAA 972 0.4856 MAQLPPKIPNISQNWPSFPHQRVPTMANSTSPNSTIVTATAPSQNHQQQQQHNLPSWIDEFLDFSSARRGAHRRSASDSIAFLETPFLEECRSGFDRLDDDQLISMFSDDVAAVSLPPAAPSSISNPSSPSSDQNSNNNDEKSMAMALDGVPLKPKNEAFEDENSCKNEAPPSLPSSAATTVTCTETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMGNSVNINGHSLQSPPTSQPQPPLQPHSLHQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01269 323 MobiDBLite consensus disorder prediction 119 141 - -
Rops7g01269 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Rops7g01269 323 Coils Coil 271 291 - -
Rops7g01269 323 PANTHER BASIC LEUCINE ZIPPER 34 1 313 - -
Rops7g01269 323 FunFam Basic leucine zipper 61 191 264 - -
Rops7g01269 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 242 IPR004827 GO:0003700|GO:0006355
Rops7g01269 323 MobiDBLite consensus disorder prediction 1 33 - -
Rops7g01269 323 CDD bZIP_plant_RF2 193 243 IPR044759 GO:0003700|GO:0006355
Rops7g01269 323 MobiDBLite consensus disorder prediction 156 178 - -
Rops7g01269 323 MobiDBLite consensus disorder prediction 118 141 - -
Rops7g01269 323 SUPERFAMILY Leucine zipper domain 192 246 IPR046347 GO:0003700|GO:0006355
Rops7g01269 323 Gene3D - 191 243 - -
Rops7g01269 323 SMART brlzneu 188 252 IPR004827 GO:0003700|GO:0006355
Rops7g01269 323 Pfam bZIP transcription factor 192 236 IPR004827 GO:0003700|GO:0006355
Rops7g01269 323 MobiDBLite consensus disorder prediction 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01269 Rops-Chr7 17197392 17200222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01269 1 270 bZIP Transcription Factor Family AT3G58120 50.847 1.02e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops7g01269 bZIP_1 8.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01269 - - gmx:100820197 386.726