Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01266 ATGTATAAACTTGTTGCTCTCCTTTGTTTTATGACCATGCAAAATATTGCATTAGGAAATGCAGTAGCTGTTGCGGATGAGGGTGCTGCTGGAGTGCATGTCATGGGAATAATAGGAGCTATCACAGACAACAATTCTCGCATTGGTAAAGAGGAGAAAGTGGCTATGAAGATGGCATTGGAGGATTTCTATCATTACAGCAATCAAAGATTTGCTCTACACATAAGGAACTCACAAGGGGATCCCTTTCAGGCTGCTCTTGCAGCTAGAGATCTTATTGATAAACAGTTGGTGCAAGCAATTGTAGGACCTCAAACATGGGAAGAGACAATTTTAGTGGCTGAGATTTGTAGCCAAAATATGAAGCCAGTTCTATCTCTAGCTGATGCAACTCCAAAGTGGTCTACTTTGAAGTGGCCCTTCATAGTGCAAACCTCACCTAGTCAATTTAAGCAGATGAAAGCCACAGCTGCTGTTATTCAGTCCTGGAAATGGCACTGTGTTAACATCATATATGAAGATAGGGATGCTTCATCCACACGAACTTTATCTCATCTCTATAGAGCCCTCAACAAAGAAGGTGTAGAAATAAGCAATCTTTTGGCCATCCCACCTTTTGTTTCAACTTCATTGTCTAAAGAACTTGAAAAGCTTAGAGAAGGTCAATGCAGAGTCTTTGTTGTTACTTTGTCCCTTCCTTTGGCCGTGAACCTCTTTGAAACTGCAAGGAAAATGCACATGATGGAGAGGGGTTATGTGTGGATCACTACTGACCCTTTTACTAGTCTTGTCCATTCCTTGAATGCATCCATTTTATCCTCAATGCAAGGGATCATTGGAGTCAAAAGCTACGTTTCAGAAAAAGGGCACCAATATGATGACTTCTACCATAAATTTCGCCAAAAGTTTAGCTCAGAAAATCCTCAAGAATTTAACAATGAACCTGGGAGATTTGCAGCCTATGCCTATGATGCTGCATGGACTGTGGCTCTAGCAATGAGTCAAACCAACAGTAAAAGGGGCCAAGTTTTGCTAGACAAGATTTTGAAAAATAATTTTACTGGCCTAAGTGGAAAAATTCAGTTCACTGACCAAATGTTAGCTCCTTCAGATACTTTTCAGATCATCAATGTGATAGGGAATGGTTACAAGGAAATTGGGTTATGGTCAGATGGACTAGGTTTCTCTAATAATATTGGCCAAAATGCTACTTACAGTTCTTCAATGAAGGAACTGGGACAAGTTTTGTGGCCAGGAAGACCATGGGGCACTCCAAGAGATTGGGCCCTGCCAGCAAGTGATAAACCACTAAGAATTGGGGTCCCCGTTTTGGCCACACTGAAACAATTCATAAATGTAATTCAGGACCAAACTGAAAACACTACCATCTTCCAGGGATTCACTATTGATCTTTTTACAGCAACGATGGAGTTGTTGCCCTACCATTTGCCATACAAATTTTATGCTTTCAATGACACATATGATAATTTGGTGAAGCAAGTTTATCTGAAGAATTTCGATGTAGTGATTGATGTAACCATAATTTCATATCGATATCAATACGCTGAATTCACTCAGCCATACACTGATCCGGGAGTGGTGATGGTAGTCCCACTTAAATCAAAAGCAGCTCATAGAGCTTGGTTATTCATGAAGCCTTTTACAAAGACCATGTGGATTATGATAGGGGCCATGGTTATCTACAACGGCTTTGTTCTATGGATGTTAGAAAGAAGCCATAGCCCTGAAATTAACGGTTCCATGCTGAATCAAACAGGGACCATGGCTTGGTTAACATTGACCCCTCTAATCAACTCAAATGGGAATATGTTACACAACAATTTATCAAAGATAGCCATGGTGGTGTGGCTGTTTGTGGCACTTATCATAACACAGACTTACACAGCGAACCTTGCCAGCATGCTAACTGTTGAACGGCTTGAACCCACAGTAGATGATGTTAATCAGCTACGGAATAACAATGCTGTGGTTGGATATGGTGCTGGATCCTTCTTGAAAAATTATCTGCAGGAAGTGTTACAGTTCCACCCTACAAACATAAGACAATTTGGTGCACTACAAGAGTATGCTGATGCTCTTAGAAGGAAAGAAATAGCAGCTGCCTTTCTTGAAGTTCCTGCATCCAAGATTTTCCTAGCAACGTATTGTAAAGAGTTCATTCAAGCAGGGCCATTGTATAAAATTGGAGGATTTGCTTTTGCATTTCCGAGGGGATCTCCATTTCTTCCAAGTGTAAACAAAGCACTGCTAGATTTAGTTGAAACTGGCAAGGTACGTGAATTAGAGAACAGAATGCTTGAATCAGAGCAATGTGAAGACATAGAACCAAATGGAGAAACTGCAAGTCTTAGCCCCAACAGCTTCTGGGCCCTTTTCATGTTGACAACAGGTACATCAACAATTGCTCTCTTGGTTTACTTTATTCGTTTGAATTATGCAAGTCGTGAAGAGACAACAATCTGGAGACTGATGATGATGATCATTCAACACTGCAACCATGCAAAGAGACGAATGTCAAGAAAAGTTAGTGACGTTGCAGAAAGTCCTATGAGCTCTCCAAACACACTTGTTATGCCCACTCAGGTTTAA 2610 0.4073 MYKLVALLCFMTMQNIALGNAVAVADEGAAGVHVMGIIGAITDNNSRIGKEEKVAMKMALEDFYHYSNQRFALHIRNSQGDPFQAALAARDLIDKQLVQAIVGPQTWEETILVAEICSQNMKPVLSLADATPKWSTLKWPFIVQTSPSQFKQMKATAAVIQSWKWHCVNIIYEDRDASSTRTLSHLYRALNKEGVEISNLLAIPPFVSTSLSKELEKLREGQCRVFVVTLSLPLAVNLFETARKMHMMERGYVWITTDPFTSLVHSLNASILSSMQGIIGVKSYVSEKGHQYDDFYHKFRQKFSSENPQEFNNEPGRFAAYAYDAAWTVALAMSQTNSKRGQVLLDKILKNNFTGLSGKIQFTDQMLAPSDTFQIINVIGNGYKEIGLWSDGLGFSNNIGQNATYSSSMKELGQVLWPGRPWGTPRDWALPASDKPLRIGVPVLATLKQFINVIQDQTENTTIFQGFTIDLFTATMELLPYHLPYKFYAFNDTYDNLVKQVYLKNFDVVIDVTIISYRYQYAEFTQPYTDPGVVMVVPLKSKAAHRAWLFMKPFTKTMWIMIGAMVIYNGFVLWMLERSHSPEINGSMLNQTGTMAWLTLTPLINSNGNMLHNNLSKIAMVVWLFVALIITQTYTANLASMLTVERLEPTVDDVNQLRNNNAVVGYGAGSFLKNYLQEVLQFHPTNIRQFGALQEYADALRRKEIAAAFLEVPASKIFLATYCKEFIQAGPLYKIGGFAFAFPRGSPFLPSVNKALLDLVETGKVRELENRMLESEQCEDIEPNGETASLSPNSFWALFMLTTGTSTIALLVYFIRLNYASREETTIWRLMMMIIQHCNHAKRRMSRKVSDVAESPMSSPNTLVMPTQV* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01266 869 Gene3D - 44 370 - -
Rops7g01266 869 Gene3D - 434 545 - -
Rops7g01266 869 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 838 IPR015683 -
Rops7g01266 869 SMART GluR_14 438 775 IPR001320 GO:0015276|GO:0016020
Rops7g01266 869 FunFam Glutamate receptor 432 546 - -
Rops7g01266 869 Pfam Receptor family ligand binding region 53 380 IPR001828 -
Rops7g01266 869 SUPERFAMILY Periplasmic binding protein-like II 414 771 - -
Rops7g01266 869 SUPERFAMILY Periplasmic binding protein-like I 34 428 IPR028082 -
Rops7g01266 869 PIRSF IGluLR_plant 2 864 IPR017103 -
Rops7g01266 869 FunFam Glutamate receptor 152 313 - -
Rops7g01266 869 Pfam Ligand-gated ion channel 772 804 IPR001320 GO:0015276|GO:0016020
Rops7g01266 869 Gene3D - 736 771 - -
Rops7g01266 869 Gene3D - 546 680 - -
Rops7g01266 869 FunFam Glutamate receptor 547 685 - -
Rops7g01266 869 Pfam Bacterial extracellular solute-binding proteins, family 3 463 771 IPR001638 -
Rops7g01266 869 Gene3D - 706 735 - -
Rops7g01266 869 CDD PBP1_GABAb_receptor_plant 38 399 IPR044440 -
Rops7g01266 869 CDD GluR_Plant 435 773 - -
Rops7g01266 869 Gene3D - 148 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01266 Rops-Chr7 17124706 17131815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01266 38 867 Ion Channels AT2G29110 32.184 1.02e-143 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01266 - - gmx:100799573 1223.38