Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01265 ATGAATTTCAAGGGCATAATAGGAGCTATTGCAGATGAAAATTCCCGTGATGGTAAAGAGGCAATAGTGGCTATTAAGATTGCATTGGAGGATTTCTATCATTACAGCAATCAAAGGTTTGTTCTACGGATAAGGAACTCTCAAGGGGATCCCCTTAAGGCTGCTCATGCAGCAAGAGATCTTATTGATAAAAAGCACGTGCAAGCAATTATAGGACCGCAAACATGGGAAGAGACAACTTTAGTGGCTGGGATTTGTGGCCAAAGCATGATGCCAGTTCTATCTCTAGCTGATGCTACTCCAAAGTGGTCAACATTAAAATGGCCATTCCTGGTCCAAAGCTCAGCTAGTCAATTTAAGCAGCTGAAAGCAGTAGCTTCTATTATTCAGTCATGGAAATGGCACTGTATTAACATCATATATGAAGATAGGGATGCTTCATCCACACAAATTTTATCTAATATCTATAGAGCCCTCAGCGAAGTAGATGTACGTATAAGCAATGTTTTAGCCATCCCACCATTTGCTTCCTCTTCATTGTCCCAAGAACTTGAGAAGCTTAGAGAAGGACAATGTAGAGTCTTTGTTGTTATCTCTTCCCTTCCTGTGGCCATAAATCTGCTTGAAACTGCAGATAAGATGAATATGATGGACAAAGATTCTGTGTGGATCACAACTGGATCTTTTACAAGTTTTTTCCATTCCTTGAATGCATCCACCATATCCTCAATGCAAGGGATCATTGGAGTCAAGAGCTACATCCCACAAATAGGAAACCAATATGATGACTTCTACCTTAAATTTCGCCAAAAGTTTAGCTCAGAGAATCCTCAGGAATTTAACAATGAGCCTGGGATATTTGCAGCCTATGCCTATGATGCTGCATGGACTGTGGCTCTAGCCATGAGCCAAACCAATAGTAAAGGGGGCCAACTTTTGCTAGATAAGATTTTGCTTAATAATTTTACTGGCTTAAGTGGAAAAATTCAGTTCAAGGACCAAAAGTTAGCTCCTTCACATACTTTTCAGATCATCAATGTAATAGGGAAGGGTTATCAGGAAATTGGGTTCTGGTCAGATGGACTAGGTTTCTCAAATGATATTGGCCAAAATGCTACTTATAGTTCTTCAATGAAGGAACTAGGACAAGTTTTGTGGCCAGGAAGACCTTGGGATATTCCAAGAGGATGGGCCTTGCCAACAAATGATAAACCACTAAGAGTTGGGGTCCCTGTTTTGGTCACATTGAAACAGTATATCAATATAACTAAAGATCAATCTAAAAATACCACCTCCTTCCAGGGATTTACTATTGATCTTTTTAGAGAAACCGTGAAGTTGTTGCCCTACCATTTACCACACAAGTTTTATGCTTTCAATGACACATATGATAATTTGGTGAAGCAGATTTATTTGAAGAATTTGGATGCAGTGATCGATGTAACAATAATTTCGTATCGATATCAGTACGCCGAATTCACTCAGCCATACACCGATCCCGGAGTGGTGATGGTAGTCCCACTTAAATCAAAAGCAGGACATAAAGCTTGGTTATTCGTGAAGCCTTTCACAAAGACCATGTGGATTCTTATAGTTGTTATGATTATCTACAATGGTTTTGTTCTATGGATGTTAGAAAGACACCACTGCCCTGAACTTAGGGGCTCCATGCTGAATCAAACTGGGACCATGGCTTGGTTGACATTGACCCCTCTCATCAACTTCAACGACATTGGGGACAAGTTACACAACAGTTTATCAAAAATGGCCATGGTGGTTTGGCTCTTTGTGGCACTTATCATAACACAGACTTACACAGCTAACCTTACCAGCATGCTCACTGTTGAAAGGCTAGAACCCACAGTAGATAATGTTGATCAGCTCAGGAATAGTAACTCCATGGTGGGGTATGGTACAGGAACCTTCTTAAAAAATTATCTGCAGGAAGTGTTACAGATCCACCCTTCAAATATCAGACAATTTGGTGCACTAGAAGAGTATGCTGAAGCTCTCAGAAGGAAAGAAATAGCAGCTGCCTTTCTTGAATTTCCTTCTGCTAAAATTTTCCTTGCAAAGTACTGTAAAGAGTTTATTCAAGCCGGGCCTTTGTATAAAATTGGAGGATTTGGATTTGCATTTCCAAAGGGATCTCCATTTCTTCCGAGTGTAAACAAAGCACTGCTAGATTTATTTGAAAGTGGCAAGCTACGTGAATTAGAGAACAAAATGCTTCGATTAGAGAAATGTGAAGAGACAGAACCATATGGAGAAACTGCAAGTCTTAGTCCCAACAGCTTCTGGGCCCTCTTCACATTGACAGCAGGCACATCAACAATTGCTCTCTTGGTTTACATCATTGGTTTGAATTATTCAAACCGTGAACATAAATTAATCAGGAGACTAATGATGGTAATGATACAACAATGGGGACATGCAAAGAGACGAATCTCAAGAAGAGGTAGTAATGTTACAGAAAGTTCCATGGACTCTCCAAATACACATGCTATGCCAAGTCAAGTTTAA 2523 0.3991 MNFKGIIGAIADENSRDGKEAIVAIKIALEDFYHYSNQRFVLRIRNSQGDPLKAAHAARDLIDKKHVQAIIGPQTWEETTLVAGICGQSMMPVLSLADATPKWSTLKWPFLVQSSASQFKQLKAVASIIQSWKWHCINIIYEDRDASSTQILSNIYRALSEVDVRISNVLAIPPFASSSLSQELEKLREGQCRVFVVISSLPVAINLLETADKMNMMDKDSVWITTGSFTSFFHSLNASTISSMQGIIGVKSYIPQIGNQYDDFYLKFRQKFSSENPQEFNNEPGIFAAYAYDAAWTVALAMSQTNSKGGQLLLDKILLNNFTGLSGKIQFKDQKLAPSHTFQIINVIGKGYQEIGFWSDGLGFSNDIGQNATYSSSMKELGQVLWPGRPWDIPRGWALPTNDKPLRVGVPVLVTLKQYINITKDQSKNTTSFQGFTIDLFRETVKLLPYHLPHKFYAFNDTYDNLVKQIYLKNLDAVIDVTIISYRYQYAEFTQPYTDPGVVMVVPLKSKAGHKAWLFVKPFTKTMWILIVVMIIYNGFVLWMLERHHCPELRGSMLNQTGTMAWLTLTPLINFNDIGDKLHNSLSKMAMVVWLFVALIITQTYTANLTSMLTVERLEPTVDNVDQLRNSNSMVGYGTGTFLKNYLQEVLQIHPSNIRQFGALEEYAEALRRKEIAAAFLEFPSAKIFLAKYCKEFIQAGPLYKIGGFGFAFPKGSPFLPSVNKALLDLFESGKLRELENKMLRLEKCEETEPYGETASLSPNSFWALFTLTAGTSTIALLVYIIGLNYSNREHKLIRRLMMVMIQQWGHAKRRISRRGSNVTESSMDSPNTHAMPSQV* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01265 840 FunFam Glutamate receptor 121 282 - -
Rops7g01265 840 Gene3D - 707 742 - -
Rops7g01265 840 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 808 IPR015683 -
Rops7g01265 840 Gene3D - 117 359 - -
Rops7g01265 840 MobiDBLite consensus disorder prediction 821 840 - -
Rops7g01265 840 FunFam Glutamate receptor 401 515 - -
Rops7g01265 840 PIRSF IGluLR_plant 4 839 IPR017103 -
Rops7g01265 840 CDD GluR_Plant 404 744 - -
Rops7g01265 840 SUPERFAMILY Periplasmic binding protein-like II 383 742 - -
Rops7g01265 840 Pfam Ligand-gated ion channel 743 775 IPR001320 GO:0015276|GO:0016020
Rops7g01265 840 CDD PBP1_GABAb_receptor_plant 7 368 IPR044440 -
Rops7g01265 840 Gene3D - 402 514 - -
Rops7g01265 840 Gene3D - 675 706 - -
Rops7g01265 840 MobiDBLite consensus disorder prediction 816 840 - -
Rops7g01265 840 Gene3D - 515 648 - -
Rops7g01265 840 Pfam Receptor family ligand binding region 24 348 IPR001828 -
Rops7g01265 840 Pfam Bacterial extracellular solute-binding proteins, family 3 430 742 IPR001638 -
Rops7g01265 840 Gene3D - 14 339 - -
Rops7g01265 840 FunFam Glutamate receptor 516 656 - -
Rops7g01265 840 SMART GluR_14 407 746 IPR001320 GO:0015276|GO:0016020
Rops7g01265 840 SUPERFAMILY Periplasmic binding protein-like I 7 397 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01265 Rops-Chr7 17112732 17116496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01265 7 794 Ion Channels AT2G29110 32.564 5.85e-142 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01265 - - gmx:100799573 1178.31