Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01254 ATGGGGGAGATAGTGGAGGTTGAAGGTGGTGGTCACATTGTACGGTCCAAAGGTCGTAAAGACCGTCACAGTAAAGTATGCACCGCGAAAGGACCAAGGGATCGACGGGTTCGTCTCTCAGCCCTCACCGCCATTCAATTCTATGACGTGCAAGATCGATTGGGCTATGATCGGCCCAGTAAGGCCCTTGATTGGCTCATTGATAAAGCCAAATCAGCCATCGATCAACTCGCTCAACTTCCACCATGGAAACCCACACAACAACAACAACAACAACAAAACGACGACGTACCGGAGAAACATAATCCCAACGCAAACCAAAACGACACCGAGGGTTTGGGTTTGGGGTTTGGGTTTGTTCCGTCGGAAAATGAAATCGCTGATAGTATTAAGTCTTTCTTCCCTGCAACGACGTCGTTTTCGCCGATTCAGTTTTACCACCAGCCCGTGCTTTTCACTGATGGCATGGTAGCGTGGAATGGTGCTGCTATTGATACTGGTGGTAACGACGGTGGTGGTGGAGGGTTTGTGTTTAACGCTCCTTCGCCGTCACCGTCGTTACCGTTACCGCTACCATCGGTGTTGTTTGGTCAGAGCCAGTATCTTTCTTCACAGAGGGGACCCCTTCAGTCCAGTAACAATAACCCTACAGTTCGTGCTTTTATTGATGCGCCGTCGTTTGTTGTCGCCGATCATCGACTTCTGCCGGCGGAGATGGTGCATCAGTCTTCTTCTTCACCGGTGACCGGATTCGCTTCTGGCGGATTCTCTGGTTTCCGTGTGCCGGCACGAATTCAGGGTGACGAGGAGTACGGCGGCGTTTCCGATAAGCCGTCGTCTGCTTCCTCCGATTCTCGCCGTTGA 864 0.5162 MGEIVEVEGGGHIVRSKGRKDRHSKVCTAKGPRDRRVRLSALTAIQFYDVQDRLGYDRPSKALDWLIDKAKSAIDQLAQLPPWKPTQQQQQQQNDDVPEKHNPNANQNDTEGLGLGFGFVPSENEIADSIKSFFPATTSFSPIQFYHQPVLFTDGMVAWNGAAIDTGGNDGGGGGFVFNAPSPSPSLPLPLPSVLFGQSQYLSSQRGPLQSSNNNPTVRAFIDAPSFVVADHRLLPAEMVHQSSSSPVTGFASGGFSGFRVPARIQGDEEYGGVSDKPSSASSDSRR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01254 287 Pfam TCP family transcription factor 18 102 IPR017887 -
Rops7g01254 287 MobiDBLite consensus disorder prediction 1 32 - -
Rops7g01254 287 MobiDBLite consensus disorder prediction 83 113 - -
Rops7g01254 287 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 110 IPR005333 GO:0003700
Rops7g01254 287 MobiDBLite consensus disorder prediction 267 287 - -
Rops7g01254 287 MobiDBLite consensus disorder prediction 83 111 - -
Rops7g01254 287 ProSiteProfiles TCP domain profile. 19 77 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01254 Rops-Chr7 16978123 16979469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01254 1 287 TCP Transcription Factor Family AT1G53230 39.895 8.74e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Rops7g01254 TCP 3.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01254 - - tpra:123895106 234.572