Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01251 ATGGGATCACCATTCAAGCCCATCTCATGCACCAGAAAAACCCCATACAGATTAGAAACCAAAAACTTATCATACAAGTTGTGCAGCCAACTTGAAGAATATACAAGTCTATGTTTTGGTTCAAATCCTAGGAGAGGTGCAAAGTTCATTTTGAAGGATGTAAACTGTGAGGCAAGGCCAGGGGAACTTACTGCTATTGCTGGTCCCAGTGGAGCTGGAAAAACCACACTACTTGAAATTCTTGCTGGGAGAATACCCCCTTGCAAAGTATCTGGGCAAGTACTTGTCAATCATAGTCCTATGGAAGTGAACAGATTCAGAAGAACATCAGGGCATGTCCCACAGGAAGATGCTTTGTTCCCATCACTTACAGTTAGAGAGACACTCATGTATAGTGCTTTGTTGAGGCTTCCCGGGGGGCAAAAAGTGGCTGCCATCAGAGTTGCAGAGTTGATGAAAGAGCTTGGGTTGGATCATATTGCAGATTCAAGAATTGGTGGTGGATCAGATCATGGCATATCAGGTGGAGAAAGGCGTAGAGTTTCCATTGGTGTTGACTTAGTCCATGATCCAGCAGTTATTTTGATTGATGAACCAACTTCAGGGTTGGATTCAGCATCAGCTCTTAATGTAGTCTCACTGCTTAGACTAATGGCATTCAATCAAGGTAAGACAGTTATTTTAACTATCCACCAACCTGGTTTCAGAATCTTAGAGCTATTTGATGGCCTCATTTTGCTGTCTGATGGATTTGTCATGCATAATGGGCCATTGAATATTCTTGAGGCTAGGCTCAAGTTAGCTGGGCATCACATTCCTGACCATGTCAATGTCCTAGAATTCGCTCTTGATGTCATGGAAAGCTTGGTTATACATACTTCAGAATCTGAGAACAACCAATTTCTTCTCAATGACAAAGAGCAACAAGATCACAAGATGAGGATGCAGTACTCTAAAATTGTCAAAGAAAAGGCTCTTTTGTACTCAAATTCTCCAATGGAGGAGATTTTGATCCTAGGACAAAGATTTTGCTGCAACATATTCAGAACCAAGCAACTATTTGTCACCAGGGTCATACAGGCCTTGGCAGCTGGATTTATACTGGGGTCGATATTTTTGAATGTTGGCAGCCAACAAAGTCAAGTAGCATTGCAAACAAGAAGTGGCTTTTTTGCCTTCAGCCTTACCTTTTTGTTATCATCAACAACAGAGGGCCTACCTATTTTCTTGGAGGAGAGAAGAACTTTTATGAGAGAGACCTCAAGAGGTGCTTATAGAGTCTCTTCCTATGTTTTAGCAAATACCCTTGTGTTTCTTCCATTCCTTCTAATGGTTGGTCTTCTGTACACTACTCCAGTTTATTGGCTGGTAGGATTAAGGAAAGACATTGATGGTTTCCTTTACTTCTCCTTGGTGGTTTGGTTGGTCCTACTCATGTCGAATTCTCTTGTGGCTTGCTTCAGCGCTCTAGTGCCAAATTTCATCTTGGGAACCTCAGTGATTGCAGGTCTAATGGGATCTTTCTTTCTATTTTCAGGGTATTTCATATCAAAGGATAAAATACCTATTTATTGGATTTTTATGCACTATTTGAGCCTATTCAAGTATCCATTTGAGTGCCTTATGATAAATGAGTATGGAGGAGAGCAAGGGAAAAGGAGATGCATAGAAATTAGTAATGATGGAGAATGCATATTATATGGTGTTGAGTTCTTAAGACAACAGCGTCTGGAAGAGTCACAAAAATGGACTAATTTGGCTGTAATGTTGGGCTTTATAATAGGGTATAGAGTGCTTAGCTTTTTTATTCTTTGGTTCAGATGTTACAGAACCAGAACATAG 1842 0.4061 MGSPFKPISCTRKTPYRLETKNLSYKLCSQLEEYTSLCFGSNPRRGAKFILKDVNCEARPGELTAIAGPSGAGKTTLLEILAGRIPPCKVSGQVLVNHSPMEVNRFRRTSGHVPQEDALFPSLTVRETLMYSALLRLPGGQKVAAIRVAELMKELGLDHIADSRIGGGSDHGISGGERRRVSIGVDLVHDPAVILIDEPTSGLDSASALNVVSLLRLMAFNQGKTVILTIHQPGFRILELFDGLILLSDGFVMHNGPLNILEARLKLAGHHIPDHVNVLEFALDVMESLVIHTSESENNQFLLNDKEQQDHKMRMQYSKIVKEKALLYSNSPMEEILILGQRFCCNIFRTKQLFVTRVIQALAAGFILGSIFLNVGSQQSQVALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTFMRETSRGAYRVSSYVLANTLVFLPFLLMVGLLYTTPVYWLVGLRKDIDGFLYFSLVVWLVLLMSNSLVACFSALVPNFILGTSVIAGLMGSFFLFSGYFISKDKIPIYWIFMHYLSLFKYPFECLMINEYGGEQGKRRCIEISNDGECILYGVEFLRQQRLEESQKWTNLAVMLGFIIGYRVLSFFILWFRCYRTRT* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01251 613 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 598 - -
Rops7g01251 613 CDD ABCG_EPDR 17 256 - -
Rops7g01251 613 ProSitePatterns ABC transporters family signature. 173 187 IPR017871 GO:0005524|GO:0016887
Rops7g01251 613 Pfam ABC-2 type transporter 231 300 IPR043926 GO:0140359
Rops7g01251 613 Pfam ABC transporter 51 201 IPR003439 GO:0005524
Rops7g01251 613 FunFam ABC transporter G family member 10 35 280 - -
Rops7g01251 613 Pfam ABC-2 type transporter 335 546 IPR013525 GO:0016020|GO:0140359
Rops7g01251 613 Gene3D - 17 275 IPR027417 -
Rops7g01251 613 SMART AAA_5 60 251 IPR003593 GO:0016887
Rops7g01251 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 265 IPR027417 -
Rops7g01251 613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 18 274 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01251 Rops-Chr7 16893679 16895844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01251 41 256 Calmodulin-binding Proteins AT2G36910 27.632 2.08e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01251 K05681 - gmx:100776372 1093.18