Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01240 ATGGCTTCCAAGGACCGTGAGAACTTTGTCTATGTTGCCAAGCTAGCTGAGCAAGCTGAACGCTACGATGAAATGGTCGATGCTATGAAGAAGGTGGTTAAGATGGATGTCGAGTTGAGTGTGGAAGAGAGAAACTTGTTCTCTGTTGGGTACAAGAATGTGGTGGGGTCCCGGAGAGCTTCATGGAGGATCTTGTCATCTATAGAGCAGAAAGAGGAATCAAAAGGGAATGAAGGGAATGCTAAGCGTATCAAGAACTATAGGCAGAAGGTGGAGTTGGAGCTCTCCGACATTTGCAGTGACATTATGATAGTTTTAGATGAGCATCTTATTCCATCCACTAACATTGCTGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGATTATTACCGGTATTTAGCAGAATTTAAAGCTGGTAATGAAAAGAAAGAGGTAGCAGATCAGTCACTTAAAGCATATCAGACAGCTTCCACCACTGCTGAGAGTGAATTGCAACCTACACATCCTATCCGATTGGGTCTGGCACTAAATTTCTCAGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCAGAACTGGATACCCTGAATGAGGAATCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGAGAGACAACCTTACTTTATGGACTTCTGATATCCCAGAAGATGGTGAGGACCAAAAAATGGAAAGCACAGCCAAGAGTGGTGAAGGAGAAGAGGAGTTGGGCCGCTAA 786 0.4338 MASKDRENFVYVAKLAEQAERYDEMVDAMKKVVKMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNEGNAKRIKNYRQKVELELSDICSDIMIVLDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYQTASTTAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMESTAKSGEGEEELGR* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01240 261 Gene3D - 1 249 IPR036815 -
Rops7g01240 261 ProSitePatterns 14-3-3 proteins signature 2. 216 235 IPR023409 -
Rops7g01240 261 PRINTS 14-3-3 protein zeta signature 153 179 IPR000308 -
Rops7g01240 261 PRINTS 14-3-3 protein zeta signature 180 206 IPR000308 -
Rops7g01240 261 PRINTS 14-3-3 protein zeta signature 38 67 IPR000308 -
Rops7g01240 261 PRINTS 14-3-3 protein zeta signature 207 236 IPR000308 -
Rops7g01240 261 PRINTS 14-3-3 protein zeta signature 87 111 IPR000308 -
Rops7g01240 261 PRINTS 14-3-3 protein zeta signature 118 140 IPR000308 -
Rops7g01240 261 Pfam 14-3-3 protein 13 234 IPR023410 -
Rops7g01240 261 PIRSF 14-3-3 1 247 IPR000308 -
Rops7g01240 261 MobiDBLite consensus disorder prediction 236 261 - -
Rops7g01240 261 SUPERFAMILY 14-3-3 protein 5 236 IPR036815 -
Rops7g01240 261 MobiDBLite consensus disorder prediction 238 261 - -
Rops7g01240 261 PANTHER 14-3-3 PROTEIN 6 237 IPR000308 -
Rops7g01240 261 Coils Coil 12 32 - -
Rops7g01240 261 SMART 1433_4 6 247 IPR023410 -
Rops7g01240 261 FunFam 14-3-3 protein epsilon 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01240 Rops-Chr7 16773067 16777461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01240 2 255 14-3-3 family AT2G42590 76.172 3.10e-146 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01240 K06630 - gmx:547574 460.299