Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01221 ATGGATTCCGAACCAGAGTTCCATGATCCTTCTCCCAGGGAATGCGAAGCTATAAAGAAATACCTCGAAACACAGAACGAATCCATTGCCACTAAGGGATTCTACTATTCTCCCTCCGCATTTCTTATCCGAAGCCATGCTGTTTCTATAATCGCTAAGGTGCCTCTGTTTTGCTACTCCGAAAACAGAGGTGAAATAGGTTCTTTCATACAAGAACCTCTCTCGCAGGGTGTAGATCCTGATGCATTTATTCCCTATCTTGCCATGAACTATTTCGATCGCTACTATTCCAGGCACTCTCTGGAAGGAATCGAAGCTGATGAAGAAAGTGAAAGAATTCGTTTGGCTGCTATCTGTTGCTTCACCCTTGCTGCCAAGATGAGGACAAAGTCTTTCTCTGCTGAACAGTTTCTGAGGGACAAATATTTGGATATCGATCATAAGAAGATAGTGTCAACGGAATTTCACATTATCAATGGACCTGAATGGAAATGGCGATCTGTGACTCCCTTTAGCTTTCTGGACTACTATTACCCCGAGTTCAGAAGATTTGGTGGTTTCAAACGTCGTTGCATCAATGAGATCATAGTCCAGGCTCAAGGAGAGATCAACTTCGTCCACTACACCCCTTCTCAGATTGCATGGGCCACTTTTCTGGCTGCTACCAGCATTGCATATCCCTCAAAGTCCGAAGTGATGATGGACAGAGCGGAGGATCTGAAAGAATGTGTGAAGCAGCTGGTTTCACTTTGCCGGACGAAGGGAATTGAGATTGAGTGCTGTGGGTCAGAAAGGGCTCCCTCTCCAGTTAAAACCATGCCAATACCGATACCGTGGCAATCTAAAGAAGCTGCAGCCCAAAAAAGAGAGCACATGGCGGTACTGTTGGTGGGTTCATCTAAAGATGAATTAGAACCTGACTCTTGGTTAAAGCCACGAAGAAAGAAAAGGGGCAAAGCAGTGAAATCAGATGAAGATGTAGATGCAGAGACTGAGGACAAGGAAGTGGTGGTGGCCGAGAAATCAAATGCAGTTGTGGTTGAGGGATCCTTTTCGGAGATTTTTCCTGCAGCAGAGACTGAGATTGAGGCAGAGCAACGAAGACTGGAGAAGGGCAAGGCAGTAGTTGAGAGATCCATTTCGGAGATTGTTCCTGCAGAAGAGGCTGCACCAAAGAAGCTAATGAACTTTGACCTGAAGTGGCCAGTGGATGTCTCCCCCTTACCAAGCGAATTTCGTTGCTGCTCTATCATTCAAAACTGTTCTTCTGGTAGACCTTTTGCTGGTTCTGTTTTGATTTGGCATTGCATTACACCATAA 1320 0.4538 MDSEPEFHDPSPRECEAIKKYLETQNESIATKGFYYSPSAFLIRSHAVSIIAKVPLFCYSENRGEIGSFIQEPLSQGVDPDAFIPYLAMNYFDRYYSRHSLEGIEADEESERIRLAAICCFTLAAKMRTKSFSAEQFLRDKYLDIDHKKIVSTEFHIINGPEWKWRSVTPFSFLDYYYPEFRRFGGFKRRCINEIIVQAQGEINFVHYTPSQIAWATFLAATSIAYPSKSEVMMDRAEDLKECVKQLVSLCRTKGIEIECCGSERAPSPVKTMPIPIPWQSKEAAAQKREHMAVLLVGSSKDELEPDSWLKPRRKKRGKAVKSDEDVDAETEDKEVVVAEKSNAVVVEGSFSEIFPAAETEIEAEQRRLEKGKAVVERSISEIVPAEEAAPKKLMNFDLKWPVDVSPLPSEFRCCSIIQNCSSGRPFAGSVLIWHCITP* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01221 439 Pfam Cyclin, N-terminal domain 84 163 IPR006671 -
Rops7g01221 439 MobiDBLite consensus disorder prediction 304 333 - -
Rops7g01221 439 Pfam Cyclin, C-terminal domain 168 251 IPR004367 -
Rops7g01221 439 Gene3D - 167 251 - -
Rops7g01221 439 SUPERFAMILY Cyclin-like 84 161 IPR036915 -
Rops7g01221 439 PANTHER CYCLINS 85 254 IPR039361 -
Rops7g01221 439 Gene3D - 86 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01221 Rops-Chr7 16508617 16511224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01221 86 233 Core Cell Cycle Gene Families AT1G70210 34.194 3.37e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01221 - K18812 aprc:113855478 278.1