Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01212 ATGAACGGAAAGCTTCAAGGTCTTGTTTTGTGCTCTCTTCTGTTCCATTTCATACCAAGCATCAACACACTGGACACTATTGCTCCAGGACAATCTATCAAAGATGATGAAACTCTAGTTTCAGCAGCTGGGACTTTCGAAGCTGGATTTTTCAACTTTGGAGATCCAAATAGGCAATATTTGGGGATATGGTACAAGGGTCTTTCTCCAAGAACAGTTGTGTGGATAGCAAATAGAGATGCCCCACTTGGAAACTCCTCAAGAGTTTTGAATATCAATGATGGAGGAAATCTTGTTATTCTTAATGCCACAGGGACTATAGTTTGGTCCTCTAATGCATCAATAACTGTAAATAAAACCGTTGTTCAGCTCTTGGACACTGGAAACCTTGTTGTGAAAGAAGAAAGCAACCCAGAGAAAGTTCTGTGGCGAAGTTTTGATCTTCCTGGGGACAATTTGCTACCAGGGATGAAAATTAGAAGTAACAAAGTCAGTGGTAATTATACATCTCTGGTATCTTGGAGGGACACAGAAGATCCTACCAGAGGTGATTATTCATACCACATAGATACTCATGGTTATCCTCAAGTAATGATTTCAAAGGGAGAGACATTATTTTGCAGAGTAGGTTCATGGAATGGCAATACTTTATCTGGAATTCCTTCTGAAACACTGTACAAATTCTTTAATTTCTCTTTTGTGATTACTGAGAAGGAAGTTTCTTATGGATATGAACTCTTGGACCAGTCTATTATTTCAAGATACATGCTCACTTCAACAGGTCAAGTGGCACGTTACATGTGGTCAGATCAGACAAGGAGTTGGCAGCTTTTCTTTCTTGGCCCTACAGACCAGTGTGATAACTATGCAATTTGTGGTGCAAATTCTAATTGTGATGTTAATAAATCTCCAACATGTGAATGCCTTCAGGGTTTCATCCCCAAATCTCAAGAAAAATGGAATTCACAAAATTGGACTGATGGGTGTGTTAGGAGAGTAAATTTAGCTTGTGGCAACAGTGATGGATTTCTGAAGTATGAGGGAATTAAGTTGCCAGACACTTCAACCTCATGGTTTAATAAGACCATGAACCTTGAGGAATGTGAGAAATTCTGTCTGAAAAACTGTTCTTGCACAGCATATGCAAGTTTAGATATCAGAGATGGTGGAAGTGGCTGCTTGCTTTGGTTTAATAACATTGTGGATGTGAGAAAACTATCAACTAGAGGACAAGACCTTTACATAAGAGTGGCAGCTTCAGAACTAGACCATAACAAGGGCTTGAACAAGAAGAAGCTTGCAGGAATTCTGGTAGGCTGTACTGTGTTCATCTTGATCATGATAATACTTGGAGTGGTCAAATTTAAGAGGAAGAAACTCGAGAAGCCAGGGGTGAACCAAATTATGATAAAATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTACATTGCCAAATGGGCAAGATATAGCTGTGAAGCGGCTTGGCAATAATTCAGGACAAGGACCAAAAGAGTTCATAAATGAAGTTAAGCTAATTGCCAATCTTCAGCACCGAAATCTTGTGAAACTACTTGGGTGTTGCATTCAAGATGATGAGAGACTCTTGATATATGAATTAATGACTAATAGAAGCTTGGACTACTTTATTTTTGATCAAACTAGAAAAGGTTTCCTGCATTGGGCACAACGTTTCCAAATTATTCGTGGGATTGCTCGAGGACTTCTCTATCTTCATGAAGATTCTAGATTAAGGATTATACACAGAGATCTCAAGACCAGCAATATTCTTCTAGATGAAAATATGAATCCCAAAATATCAGACTTTGGTCTTGCTAGGACATTTGGAGGAGAGGAAGCTGAAGGGAAAACAATGAGAGTAGTGGGAACTTATGGCTATATTTCTCCGGAGTATGCAGCACGTGGGTTTTTCTCAGTGAAATCTGATGTCTTCAGTTTTGGTGTTATTGTACTAGAGATAGTTAGTGGAAGGAAGAACAGGAAATGTTATGAACATCATGATCTTGACCTTCTTGGCAATGCATGGAGACTGTGGTGTGAAGAAAAGCTGTCAGAGCTGATAGATGACTCTCTAGGAAATTCAATTGCTCTAGCTGAACCTGAAGTATTGAGATGTATTCACACTGGGCTTTTATGTGTGCAAGATAGACCAGAGGATAGGCCAGACATGTCAGCTGTAGTTCTAATGCTGAATGGTGAGAAACCATTGCCCAGACCAAAGGAACCTGCCTTTTATCCACACCAATTTGGCTCTTCATCAGGAATTAGTAAGCTGCATTCAGCCAATGAAATTTCTATGACATTGTTAAATCCAAGATAG 2343 0.3948 MNGKLQGLVLCSLLFHFIPSINTLDTIAPGQSIKDDETLVSAAGTFEAGFFNFGDPNRQYLGIWYKGLSPRTVVWIANRDAPLGNSSRVLNINDGGNLVILNATGTIVWSSNASITVNKTVVQLLDTGNLVVKEESNPEKVLWRSFDLPGDNLLPGMKIRSNKVSGNYTSLVSWRDTEDPTRGDYSYHIDTHGYPQVMISKGETLFCRVGSWNGNTLSGIPSETLYKFFNFSFVITEKEVSYGYELLDQSIISRYMLTSTGQVARYMWSDQTRSWQLFFLGPTDQCDNYAICGANSNCDVNKSPTCECLQGFIPKSQEKWNSQNWTDGCVRRVNLACGNSDGFLKYEGIKLPDTSTSWFNKTMNLEECEKFCLKNCSCTAYASLDIRDGGSGCLLWFNNIVDVRKLSTRGQDLYIRVAASELDHNKGLNKKKLAGILVGCTVFILIMIILGVVKFKRKKLEKPGVNQIMIKLGEGGFGPVYKGTLPNGQDIAVKRLGNNSGQGPKEFINEVKLIANLQHRNLVKLLGCCIQDDERLLIYELMTNRSLDYFIFDQTRKGFLHWAQRFQIIRGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTFGGEEAEGKTMRVVGTYGYISPEYAARGFFSVKSDVFSFGVIVLEIVSGRKNRKCYEHHDLDLLGNAWRLWCEEKLSELIDDSLGNSIALAEPEVLRCIHTGLLCVQDRPEDRPDMSAVVLMLNGEKPLPRPKEPAFYPHQFGSSSGISKLHSANEISMTLLNPR* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01212 780 Pfam D-mannose binding lectin 72 175 IPR001480 -
Rops7g01212 780 ProSiteProfiles Protein kinase domain profile. 466 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01212 780 Gene3D Transferase(Phosphotransferase) domain 1 542 744 - -
Rops7g01212 780 Pfam Protein tyrosine and serine/threonine kinase 470 735 IPR001245 GO:0004672|GO:0006468
Rops7g01212 780 SUPERFAMILY Protein kinase-like (PK-like) 469 738 IPR011009 -
Rops7g01212 780 Gene3D - 20 146 IPR036426 -
Rops7g01212 780 Pfam PAN-like domain 337 403 IPR003609 -
Rops7g01212 780 CDD B_lectin 31 149 IPR001480 -
Rops7g01212 780 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Rops7g01212 780 CDD STKc_IRAK 472 740 - -
Rops7g01212 780 PIRSF SRK 4 469 IPR024171 GO:0004674
Rops7g01212 780 PIRSF SRK 466 780 IPR024171 GO:0004674
Rops7g01212 780 SMART serkin_6 466 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01212 780 Gene3D Hepatocyte Growth Factor 334 415 - -
Rops7g01212 780 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Rops7g01212 780 Gene3D Phosphorylase Kinase; domain 1 464 541 - -
Rops7g01212 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 417 - -
Rops7g01212 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 542 745 - -
Rops7g01212 780 SMART ntp_6 338 417 IPR003609 -
Rops7g01212 780 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Rops7g01212 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 146 - -
Rops7g01212 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 180 IPR036426 -
Rops7g01212 780 FunFam Uncharacterized protein 477 541 - -
Rops7g01212 780 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 725 - -
Rops7g01212 780 SMART blect_4 30 149 IPR001480 -
Rops7g01212 780 CDD PAN_AP_plant 333 418 - -
Rops7g01212 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01212 Rops-Chr7 16300385 16303664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01212 423 755 Receptor kinase-like Gene Family AT4G23190 48.901 1.15e-112 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01212 PK_Tyr_Ser-Thr 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01212 - - ccaj:109805721 953.355