Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01209 ATGAACGGAAAGCTTCAAGGTCTAGTTTTGTGCTCTCTTCTGTTCCATTTCATACCAAGCATCAAAACACTGGACACTATTGCTCCAGGACAATCTATCAAAGATGATGAAACTCTAGTTTCAGCAGCTGGGACTTTTGAAGCTGGATTTTTCAACTTTGGAGATCCAAATAGGCAATATTTGGGTATATGGTACAAGGGTCTTTCTCCAAGAACAGTTGTGTGGATAGCAAATAGAGATGCCCCACTTGGAAACTCCTCAAGAGTTTTGAATATCAGTGATGGAGGAAATCTTGTTATTCTTAATGCCACAGGGACTATAGTTTGGTCCTCTAATGCATCAATAACTGTAAATAAACCAGTTGTGCAGCTCTTGGACACCGGAAACCTTGTTGTGAAAGAAGAAAGCAACCCAGAGAAAGTTCTGTGGCGAAGTTTTGATCTTCCTGGGGACACTTTGCTCCCAGGGATGAAAATTAGAAGTAACAAAGTCAGTGGTAATTATACAGCTCTGGTATCTTGGAGGGACACAGAAGATCCTACCAGAGGTGATTATTCATACCACATAGATACTCATGGTTATCCTCAAGTAGTGATTTCAAAGGGAGAGACATTATTGTGCAGAGTAGGTTCATGGAATGGCAATACTTTATCTGGAATTCCTTCTGAAACACTGTACAAATTCTTTAATTTCTCTTTTGTGATTACTGAGAAGGAAGTTTCTTATGGATATGAACTCTTGGACCAGTCTATTATTTCAAGATACATGCTCACTTCAACAGGTCAAGTGGCACGTTACATGTGGTCAGATCAGACAAGGAGTTGGCAGCTTTTCTTTCTTGGCCCTACAGACCAGTGTGATAACTATGCAATTTGTGGTGCAAATTCTAATTGTGATGTTAATAAATCTCCAACATGTGAATGCCTTCAGGGTTTCATCCCCAAATCTCAAGAAAAATGGAATTCACAAAATTGGACTGATGGGTGTGTTAGGAGAGTAAATTTAGCTTGTGGCAACAGTGATGGATTTCTGAAGTATGAGGGAATTAAGTTGCCAGACACTTCAACCTCAGGGTTTAATGAGACCATGAACCTTGAGGAATGTGAGCAATTCTGTCTGAAAAACTGCTCTTGCACAGCATATGCAAATTTAGATATCAGAGATGGTGGAAGTGGCTGCTTGCTTTGGTTTAACAACATTGTGGATGTGAGAAAACTATCAACTGGAGGACAAGACCTTTACATAAGATTGGCAGCTTCAGAACTAGACCATAACAAGGGCTTGAACAAGAAGAAGCTTGCAGGAATTCTGGTAGGCTGTACTATGTTCATCTTGGTCATGATAATACTTGGAGTGGTTAAATTTAAGAGGAAGAAACTCGAGAAGCCAGGGGTGAACCAAATATCTAGCTGGAAGAATCACACTGACGACAAAGAGAATGAAGACATTGACATACCAATGTTTGATTTATCAACAATAGCTAATGCAACTAGTAACTTCTCCATTGATAACAAACTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTATATTGCCAAATGGGCAAGATATAGCTGTGAAGCGGCTTGGCAATAATTCAGGACAAGGACCAAAAGAGTTCATTAATGAAGTTAAGCTAATTGCCAATCTTCAGCACCGAAATCTTGTGAAACTACTTGGGTGTTGCATTCAAGATGATGAGAGACTCTTGATATATGAATTCATGACTAATAGAAGCTTGGACTACTTTATTTTTGATCAAACTAGAAAAGATTTCCTGCATTGGGTTCAACGTTTCCAAATTATTCGTGGGATTGCTCGAGGACTTCTCTATCTTCATGAAGATTCTAGATTAAGGATTATACACAGAGATCTCAAGACCAGCAATATTCTTCTAGATGAAAATATGAATCCCAAAATATCAGACTTTGGTCTTGCTAGGACATTTGGAGGAGAGGAAGCTGAAGGGAAAACAATGAGAGTAGTGGGAACTTATGGCTATATTTCTCCTGAGTATGCAGCACGTGGGTTTTTCTCAGTGAAATCTGATGTCTTCAGTTTTGGTGTTATTGTACTAGAGATAGTTAGTGGAAGGAAGAACAGGGAATATTATGACCATCATGATCTTGACCTTCTTGGCAATGCATGGAGACTGTGGTGTGAAGAAAAGCCATCAGAGCTGATAGATGACTCTCTAGGAAATTCAATTGCTCTAGCTGAACCTGAAGTATTGAGATGCATTCACATTGGGCTTTTATGTGTGCAAGATAGACCAGAGGATAGGCCAGACATGTCAGCTGTAGTTCTAATGCTGAATGGTGAGAAACCATTGCCTAGGCCAAAAGAACCTGCCTTTTATCCACACCAATTTGGCTCTTCATCAGGAACTAGTAAGCTGCATTCAGCCAATGAAATTTCTATGACATTGTTAAATCCAAGATAG 2445 0.3963 MNGKLQGLVLCSLLFHFIPSIKTLDTIAPGQSIKDDETLVSAAGTFEAGFFNFGDPNRQYLGIWYKGLSPRTVVWIANRDAPLGNSSRVLNISDGGNLVILNATGTIVWSSNASITVNKPVVQLLDTGNLVVKEESNPEKVLWRSFDLPGDTLLPGMKIRSNKVSGNYTALVSWRDTEDPTRGDYSYHIDTHGYPQVVISKGETLLCRVGSWNGNTLSGIPSETLYKFFNFSFVITEKEVSYGYELLDQSIISRYMLTSTGQVARYMWSDQTRSWQLFFLGPTDQCDNYAICGANSNCDVNKSPTCECLQGFIPKSQEKWNSQNWTDGCVRRVNLACGNSDGFLKYEGIKLPDTSTSGFNETMNLEECEQFCLKNCSCTAYANLDIRDGGSGCLLWFNNIVDVRKLSTGGQDLYIRLAASELDHNKGLNKKKLAGILVGCTMFILVMIILGVVKFKRKKLEKPGVNQISSWKNHTDDKENEDIDIPMFDLSTIANATSNFSIDNKLGEGGFGPVYKGILPNGQDIAVKRLGNNSGQGPKEFINEVKLIANLQHRNLVKLLGCCIQDDERLLIYEFMTNRSLDYFIFDQTRKDFLHWVQRFQIIRGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTFGGEEAEGKTMRVVGTYGYISPEYAARGFFSVKSDVFSFGVIVLEIVSGRKNREYYDHHDLDLLGNAWRLWCEEKPSELIDDSLGNSIALAEPEVLRCIHIGLLCVQDRPEDRPDMSAVVLMLNGEKPLPRPKEPAFYPHQFGSSSGTSKLHSANEISMTLLNPR* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01209 814 Gene3D Phosphorylase Kinase; domain 1 473 575 - -
Rops7g01209 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 759 - -
Rops7g01209 814 SMART serkin_6 500 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01209 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 417 - -
Rops7g01209 814 Pfam PAN-like domain 337 403 IPR003609 -
Rops7g01209 814 SMART ntp_6 338 417 IPR003609 -
Rops7g01209 814 Gene3D Hepatocyte Growth Factor 334 417 - -
Rops7g01209 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Rops7g01209 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 146 - -
Rops7g01209 814 PIRSF SRK 3 814 IPR024171 GO:0004674
Rops7g01209 814 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Rops7g01209 814 CDD B_lectin 31 149 IPR001480 -
Rops7g01209 814 Pfam D-mannose binding lectin 72 175 IPR001480 -
Rops7g01209 814 Gene3D - 20 146 IPR036426 -
Rops7g01209 814 ProSiteProfiles Protein kinase domain profile. 500 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01209 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 575 - -
Rops7g01209 814 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Rops7g01209 814 Gene3D Transferase(Phosphotransferase) domain 1 576 778 - -
Rops7g01209 814 SMART blect_4 30 149 IPR001480 -
Rops7g01209 814 CDD STKc_IRAK 506 774 - -
Rops7g01209 814 SUPERFAMILY Protein kinase-like (PK-like) 485 793 IPR011009 -
Rops7g01209 814 CDD PAN_AP_plant 333 418 - -
Rops7g01209 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 179 IPR036426 -
Rops7g01209 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 779 - -
Rops7g01209 814 Pfam Protein tyrosine and serine/threonine kinase 501 770 IPR001245 GO:0004672|GO:0006468
Rops7g01209 814 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01209 Rops-Chr7 16246433 16261972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01209 423 789 Receptor kinase-like Gene Family AT4G23190 50.802 6.47e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01209 PK_Tyr_Ser-Thr 7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01209 - - ccaj:109805721 1329.69