Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01208 ATGGAAGGCTTTACCTTGCTTCTATTTTGCCTTGCCTTGCTGAATAATATAGCAGCCACCACTTCAGCTATTGAAAGAGAGCGATCACATAAATCCAACATCCGGAAGCAAAAGACTGTCATCATAAGCTGTGCGTCAGGAATTTTAATTCTATGCTTAACCTTCATCATTTATAGATGGCAGAATACACGGCAGAGAGGCAGAAGGATGGAAGACGATCAAGAAAGAGATACAAATGCAATAATTGAGCACGGGGAGGAAGATCTAGAATTACCCTTGTTTGATAAGTCAACAATTACTTTTGCTACCAACAACTTTTCAACTGACAATAAACTAGGGGAAGGGGGCTTTGGATCAGTTTATAAGGGTGTCCTTGATGATGGAAGAGAAATAGCTGTCAAGAGGCTCTCAAAGAATTCAAGACAAGGACTTCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCACAGGAATTTAGTGAAGCTACTAGGATACTGCATCCAAGCAGGGGAAAGATTGCTGGTTTATGAATTTATGCCCAACAAAAGCTTGGACTTCTTTATATTTGATGAAGAGAAGGGCATGTCACTAGATTGGCCAAGGCGCTTGCAAATTATTAATGGGATCGCTCGGGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAAGCAGCAAATGTTTTGTTAGATAGTGAAATGAACCCAAAAATCTCAGACTTTGGATTAGCTAGAAGCTTTGGAGGGAATGAAATTGTAGCAAATACAGATCATGTGGTTGGAACCTATGGCTATCTGCCGCCAGAGTATCTAATTGATGGAACTTACTCAACAAAATCCGACGTATTCAGCTTTGGTGTGTTGATGTTGGAGATAGTGAGTGGGAAGAGAAATAGAGGGTTCTATCATAAAGATAATCTTGTGGCCCAGGCATGGAGACTATTTAAAGAAGGCAAGTGGTCTGAAATAGTTGATGCAAAAATAAGAGCTTCTTTAAATTTATCTGCAGTGCTAAGATCAATTCATGTGGGATTACTATGTGTGCAACTAAGTCCAGACTACAGGCCAAGCATGTCATCTGTGGTTCTAATGTTGAGTAGTGAATCCACACTGCCTCAGCCTAAAATGCCTGGATTCTTTCCAGAAAGTGATATGGTTGGAGACAGTTCTTCGTCAAGTAGTTATAAACCATGCTCAAATGATATCACAGTCAGCCAAATGCATGGTCGTTAA 1260 0.3968 MEGFTLLLFCLALLNNIAATTSAIERERSHKSNIRKQKTVIISCASGILILCLTFIIYRWQNTRQRGRRMEDDQERDTNAIIEHGEEDLELPLFDKSTITFATNNFSTDNKLGEGGFGSVYKGVLDDGREIAVKRLSKNSRQGLQEFKNEVMHIAKLQHRNLVKLLGYCIQAGERLLVYEFMPNKSLDFFIFDEEKGMSLDWPRRLQIINGIARGLLYLHQDSRHRIVHRDLKAANVLLDSEMNPKISDFGLARSFGGNEIVANTDHVVGTYGYLPPEYLIDGTYSTKSDVFSFGVLMLEIVSGKRNRGFYHKDNLVAQAWRLFKEGKWSEIVDAKIRASLNLSAVLRSIHVGLLCVQLSPDYRPSMSSVVLMLSSESTLPQPKMPGFFPESDMVGDSSSSSSYKPCSNDITVSQMHGR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01208 419 Pfam Domain of unknown function (DUF3403) 375 419 IPR021820 GO:0004674
Rops7g01208 419 MobiDBLite consensus disorder prediction 394 419 - -
Rops7g01208 419 Gene3D Transferase(Phosphotransferase) domain 1 182 383 - -
Rops7g01208 419 SUPERFAMILY Protein kinase-like (PK-like) 89 392 IPR011009 -
Rops7g01208 419 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 69 181 - -
Rops7g01208 419 ProSitePatterns Protein kinases ATP-binding region signature. 112 134 IPR017441 GO:0005524
Rops7g01208 419 MobiDBLite consensus disorder prediction 392 419 - -
Rops7g01208 419 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 182 382 - -
Rops7g01208 419 CDD STKc_IRAK 112 374 - -
Rops7g01208 419 SMART serkin_6 106 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01208 419 Gene3D Phosphorylase Kinase; domain 1 65 181 - -
Rops7g01208 419 ProSiteProfiles Protein kinase domain profile. 106 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01208 419 Pfam Protein tyrosine and serine/threonine kinase 108 372 IPR001245 GO:0004672|GO:0006468
Rops7g01208 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Rops7g01208 419 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01208 Rops-Chr7 16246345 16261798 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01208 48 404 Receptor kinase-like Gene Family AT4G23190 50.409 9.64e-127 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01208 PK_Tyr_Ser-Thr 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01208 - - gmx:100795006 590.882