Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01206 ATGCTGAATAATTTAGCAGCCACCACTGCCGGTGACACTATTGACACAACCCAACCTATCAATGATGGCCAGATCATAGTTTCAGCTGGTGAAAGATTTGCACTGGGATTCTTCAGTCCAGGCAATTCCAAGAACCGTTATGTAGGAATTTGGTATCATAAAATCCCAACAAGGACAGTAGTATGGGTTGCCAACAGAGATAACCCCCTTACTGACTCCTCAGGGGTCTTGAAGATCAATGAAACTGGAATTTTTGTCCTTCTGAACCATAACAAGAGTGTCATCTGGTCTTCCAACTCAACAAGGTCAGCACAGTATCCAATTGCAAAACTTTTGGATTCTGGAAATTTCATTGTGCAGGATAGCAGCAATAATGACAGAAAAGATTTACTATGGCAAAGTTTTGATTATCCAGTAGACACACTCTTGCCAGGACAAAAGGTTGGAAGAAATCTAAAAACAGGCCTGAATTGGTACCTGTCGTCATGGAAGAGCCCGGATGATCCATCTCAAGGTATTTATAATTACCAACTTGATACTGATGGATATCCACAATTTGTTTTAAGAGAAGGCACTGGCAAAAGATATCGTCTTGGATCATGGAATGGTATTCAGTTTAGTGGGGCACCTCAGTTGAAAACAAATTCTATATTTACATTTAATTTTGTTTCTAGTGAGGAAGAGATGTATTATATATATGAGCTTATCAACAAGTCAATTCTTTATAGGGTGTTGTTAACAACAGATGGATATATCAAGCGGCTATATTGGAGTGGTGAAGAAAATGGTTGGATTGAATTTTTAAGATTGCCTGTGGATGATTGTGATTACTATGAAAGATGTGGAGCATTTTCCAGCTGTAATGTAAACAATTTTCCTGTGTGTGATTGCTTGGATGGATTTGTGCACAATACGACAGATATATACAAAGATTGTGTCAGGAGAACTTCACTGAGTTGCCATGGAGATGGGTTTTTGAAGTTTTCTGGGCTGAAGTTACCAGACACAGAGAGATCCTCGTTTGATAGAAATATTAGCCTTGAGGATTGTAGGATGTTGTGCCTGAAGAATTGCTCCTGTACAGCTTATGCAGCTTTGGATATCAGCAAAGGGGCGAGTGGGTGTTTACTGTGGTTTGATGAGCTGAATGACATAAAAGAATTGACTGCATCTGATGAAGATATTTACATAAGGATGGCTGGGTCAGAACTAGAAGCTATTGAAAGAAAGCGATCACATAAATCCAACATCAGGAAGCAAGAGACTGTCATCATAAGCTGTGTGTTGTTAGGAATTTTAATCCTATGCTTAACCTTCCTCATTTACAGATGGAAGAAGACACGGCAGAAAGGCAGAAGGATGGAAGACGATCCAGAAAGAGATACAAATGCAATAATTGAGCACGGGGATGATCTAGAATTACCCTTTTTTGATAAGTCTACAATTACTTTTGCTACCAATAACTTTTCAACTGACAATAAACTAGGGGAAGGGGGTTTTGGATCAGTTTATAAGGGTGTCCTTGATGATGGAAGAGAAATAGCTGTCAAGAGGCTCTCAAAGAATTCAAGTCAAGGACTCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCACAGGAATTTAGTGAGGCTACTAGGATACTGCATCCAAGCAGGGGAAAGATTGCTGGTTTATGAATTTATGCCCAACAAAAGCTTGGACTTGTTCATATTTGATGAAGAGAAGGGCATGTTACTAGATTGGCCAAGGCGCTTGCAGATTATTAATGGGATAGCTCGTGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTCCATAGAGATCTCAAAGCTGCCAATGTTTTGTTAGATAGTGAACTGAACCCAAAAATCTCAGACTTTGGACTGGCTAGAAGCTTTGGAGGGAATGAAATTGAAGCAAATACAGAGCATGTGGTTGGAACCTATGGCTATCTACCACCAGAGTATCTAATTGATGGAACTTACTCAACAAAATCCGATGTATTCAGCTTTGGTGTGTTGATATTGGAGATTGTGAGTGGGAGGAAAAATAGAGGGTTCTATCATCAAGATAATCTTCTGGCTCATGCATGGAGACTATTTAAAGAAGGCAAATGGTCTGAAATAGTTGATGCAAAAATAAGAGCTTCTTTAAATTTATCTGCAGTGCTAAGATCAATTCATGTGGGATTACTATGTGTGCAACTAAGTCCAGACTACAGGCCAAACATGTCCTCTGTGGTTCTGATGTTGAGCAGTGAATCCACACTACCGCAGCCTAAAATGCCTGGATTCTTTACAGAAAGTGATATGATTGGAGACAGTTCTTCATCAAGCAGTTATAAACCATGCTCAACTGATATCACAGTCAGCCAAATGCATGGTCGTTAA 2409 0.3935 MLNNLAATTAGDTIDTTQPINDGQIIVSAGERFALGFFSPGNSKNRYVGIWYHKIPTRTVVWVANRDNPLTDSSGVLKINETGIFVLLNHNKSVIWSSNSTRSAQYPIAKLLDSGNFIVQDSSNNDRKDLLWQSFDYPVDTLLPGQKVGRNLKTGLNWYLSSWKSPDDPSQGIYNYQLDTDGYPQFVLREGTGKRYRLGSWNGIQFSGAPQLKTNSIFTFNFVSSEEEMYYIYELINKSILYRVLLTTDGYIKRLYWSGEENGWIEFLRLPVDDCDYYERCGAFSSCNVNNFPVCDCLDGFVHNTTDIYKDCVRRTSLSCHGDGFLKFSGLKLPDTERSSFDRNISLEDCRMLCLKNCSCTAYAALDISKGASGCLLWFDELNDIKELTASDEDIYIRMAGSELEAIERKRSHKSNIRKQETVIISCVLLGILILCLTFLIYRWKKTRQKGRRMEDDPERDTNAIIEHGDDLELPFFDKSTITFATNNFSTDNKLGEGGFGSVYKGVLDDGREIAVKRLSKNSSQGLQEFKNEVMHIAKLQHRNLVRLLGYCIQAGERLLVYEFMPNKSLDLFIFDEEKGMLLDWPRRLQIINGIARGLLYLHQDSRHRIVHRDLKAANVLLDSELNPKISDFGLARSFGGNEIEANTEHVVGTYGYLPPEYLIDGTYSTKSDVFSFGVLILEIVSGRKNRGFYHQDNLLAHAWRLFKEGKWSEIVDAKIRASLNLSAVLRSIHVGLLCVQLSPDYRPNMSSVVLMLSSESTLPQPKMPGFFTESDMIGDSSSSSSYKPCSTDITVSQMHGR* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01206 802 Pfam D-mannose binding lectin 59 164 IPR001480 -
Rops7g01206 802 Gene3D Hepatocyte Growth Factor 318 397 - -
Rops7g01206 802 CDD PAN_AP_plant 316 400 - -
Rops7g01206 802 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 6 135 - -
Rops7g01206 802 SUPERFAMILY Protein kinase-like (PK-like) 473 773 IPR011009 -
Rops7g01206 802 Gene3D Transferase(Phosphotransferase) domain 1 565 767 - -
Rops7g01206 802 Pfam Protein tyrosine and serine/threonine kinase 491 754 IPR001245 GO:0004672|GO:0006468
Rops7g01206 802 CDD B_lectin 17 138 IPR001480 -
Rops7g01206 802 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 453 564 - -
Rops7g01206 802 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 169 IPR036426 -
Rops7g01206 802 SMART blect_4 17 138 IPR001480 -
Rops7g01206 802 SMART ntp_6 320 399 IPR003609 -
Rops7g01206 802 Pfam PAN-like domain 320 385 IPR003609 -
Rops7g01206 802 ProSiteProfiles PAN/Apple domain profile. 320 400 IPR003609 -
Rops7g01206 802 Pfam S-locus glycoprotein domain 196 303 IPR000858 GO:0048544
Rops7g01206 802 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 748 - -
Rops7g01206 802 SMART serkin_6 489 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01206 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Rops7g01206 802 ProSiteProfiles Protein kinase domain profile. 489 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01206 802 Gene3D Phosphorylase Kinase; domain 1 465 564 - -
Rops7g01206 802 PIRSF SRK 1 802 IPR024171 GO:0004674
Rops7g01206 802 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 765 - -
Rops7g01206 802 Gene3D - 6 135 IPR036426 -
Rops7g01206 802 ProSiteProfiles Bulb-type lectin domain profile. 11 132 IPR001480 -
Rops7g01206 802 CDD STKc_IRAK 495 757 - -
Rops7g01206 802 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01206 Rops-Chr7 16195641 16200055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01206 423 787 Receptor kinase-like Gene Family AT4G23190 48.800 6.37e-121 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01206 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01206 - - gmx:100795006 1201.04