Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01204 ATGAAGGTGGTAGCAATAATCATCATCGTAGCCTCAGTTCTTACTCTGATTCTGGCTTTGTACTTTGTTGGCAAGAAGATGAAAAAATCCAGAGCTGATGAAACAATGAACAACTTGATGGTGGAGAATAATGAAGAGGATGAGAAAGAAGACCTGGAGCTTCCTGTCTTTGATCTTGCTACTATTGTGAAAGCAACTGATGGCTTCTCAATTAACAAGAAGCTTGGAGAAGGTGGATTTGGGTCTGTATACATGGGTATCCTAGCAGATGGACAACAAATTGCTGTGAAGAGGCTCTCACAGAGTTCTGGACAAGGATTTAGTGAATTTAAGAATGAAGTTTTATTGATTGCCAAACTTCAGCATCGAAACCTAGTTAAGCTTCTCGGTTGTTGCATTCAAGGAGAGGAGAAGATGCTTATCTATGAATACATGCCCAACAAAAGCCTAGACTCCTTTATCTTCGATCATGAAAAACTTAAAGTTTTGGATTGGCCAAAGCGCTTCAACATTATTTGTGGGATTGCCCGAGGACTAGTGTATCTTCATCAAGATTCTAGGCTGAGGATAATACATAGAGACCTTAAAGCAAGTAATGTCTTACTTGACAATGAGTTGAACCCAAAAATATCTGATTTTGGCATGGCTAGAACTTTTGGAGGAGATCAAACTGAAGGGAACACTAGGAGGGTGGTTGGAACATATGGTTATATGGCACCTGAATATGCCATTCATGGGCTATTCTCAGTAAAATCTGATGTCTTCAGCTTTGGTGTATTATTACTGGAGATAGTAAGTGGAAAGAAGAACAGAGGATTTTCCAATTCAAATAACAGTATAGACCTTATTGGACAGGCATGGAGATTTTGGAAAGAAAACAGACCCTTGGACTTGATTGATTCTAGCATGGAGAGTTCATCTGATTTATCAGAAGCATTTCGTTGCATCCATATAAGTCTTCTTTGTGTCCAACAGCATCCTGAGGATAGGCCAAATATATCAAATGTGGTTGTGATGTTGAGCAGTGAGAGTGCCTTGCCTCAACCTAAGGAACCTGCTTTCCTTATGGAGAAGTTCTTTCTTGAAGCAAATTCTTCTGCCAAGCACCAGTTTTCTTCAACCAATAACATTAGTCTTACATTGTTAGAGCCCCGGTAG 1158 0.3972 MKVVAIIIIVASVLTLILALYFVGKKMKKSRADETMNNLMVENNEEDEKEDLELPVFDLATIVKATDGFSINKKLGEGGFGSVYMGILADGQQIAVKRLSQSSGQGFSEFKNEVLLIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDSFIFDHEKLKVLDWPKRFNIICGIARGLVYLHQDSRLRIIHRDLKASNVLLDNELNPKISDFGMARTFGGDQTEGNTRRVVGTYGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGKKNRGFSNSNNSIDLIGQAWRFWKENRPLDLIDSSMESSSDLSEAFRCIHISLLCVQQHPEDRPNISNVVVMLSSESALPQPKEPAFLMEKFFLEANSSAKHQFSSTNNISLTLLEPR* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01204 385 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 145 348 - -
Rops7g01204 385 Gene3D Phosphorylase Kinase; domain 1 26 144 - -
Rops7g01204 385 Gene3D Transferase(Phosphotransferase) domain 1 145 351 - -
Rops7g01204 385 Pfam Domain of unknown function (DUF3403) 341 385 IPR021820 GO:0004674
Rops7g01204 385 ProSitePatterns Protein kinases ATP-binding region signature. 75 97 IPR017441 GO:0005524
Rops7g01204 385 Pfam Protein tyrosine and serine/threonine kinase 70 339 IPR001245 GO:0004672|GO:0006468
Rops7g01204 385 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 33 144 - -
Rops7g01204 385 CDD STKc_IRAK 75 340 - -
Rops7g01204 385 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01204 385 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 365 - -
Rops7g01204 385 SMART serkin_6 69 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01204 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Rops7g01204 385 SUPERFAMILY Protein kinase-like (PK-like) 52 350 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01204 Rops-Chr7 16175429 16179305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01204 3 357 Receptor kinase-like Gene Family AT4G23230 54.494 1.94e-136 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01204 PK_Tyr_Ser-Thr 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01204 - - cave:132173746 511.146