Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01197 ATGGATATGTTTCTTACCCTTACGTTAATCAGTTTTCATGTTCTCTTTCCCAATACAATGGTGTCAACTTCAGCTGATAACCAAAGTGTCCATGCTCAGGGAACTAAACGTTCTGGGATGATAGATGATAGCTACTGTAGCTATCATAGAGTTTGTGGAGCCAATGGGAATTGTGACCTTAACAAGGCACCAGCTTGTGTATGTTTAGATGGTTTCACACCAAAGTCACCCAGTGGCTGGGATTCCATGGACTATACACAGGGATGTGTACGTGATAAAACATTGAATTGTACAATAGATGTGTTCCTCAAATATAGTGTGTTCCAAGTACCCAGTGGCACATATTCTTTGTTAAACCAAAGCTTGGTAGAGGAGGATTGCAAAGAAAAATGCTTGAGAAACTGTTCTTGTGTGGCTTATACCATGGGGAGTGGCTGCAAATTGTGGACTGGGGATTTATTTGATGTTAGGGTGATCAAAGAAGAAGGGCACGATCTGTATATTCGAATGCCAGCTTCAGAGCTAGACCCTGAAGAGGAAACTCACGGGCATAATGAGCGAAATATGGTGGGAGTAATAATTGGGAGTACTGCTGCTATAATTTCTGGTATGATCATTTGTTTCCGTTACATGCACAGGAGAAGCTTAAGATCAAAAGGAAATATAAGAACAGATGAGATAGTTAGTCAAGGAGATCTGGAGCTTCCATTATTTGACCTATCAAGAATAGCTGCGGCTACGGATAACTTTTCAGCCAACAACAAGCTTGGAGAAGGTGGTTTTGGACCTGTATACAAGGGTACATTAGATGGCGGGCAACAAATTGCTGTTAAGAGGCTTTCACGTAGTTCTGGGCAAGGGCTAAATGAATTCAAAAATGAAGTAATACTAATAGCTAAACTTCAGCACCGTAATCTTGTAAAGCTTCATGGATGTTGCATCCAAGAGGAAGAAAAATTGCTGATATATGAATACATGCCTAATAGAAGCCTAGATTGTTTAATTTTTGATGAAACACAAGGAAAACTCTTGGATTGGCCTAAGCGTTTTAAGATTATTTATGGGATTGCTAGGGGCCTGCTATACCTTCACCAAGATTCTAGGCTAAGGGTTATACATAGAGACATCAAAGCAAGTAATGTTCTGCTAGACAGTGAGATGGAGCCAAAGATCTCAGACTTTGGTTTGGCTAAAAGTTTTGTTGGAGGAGATCAGAGCAAAGGAAATACAAATAGAGTTGTGGGTACTTATGGATATGTGGCTCCAGAATATGCTGTTAATGGACACTTTTCAGTGAAATCTGATGTCTTTAGCTTTGGGATTTTGTTGCTTGAGATCATAACTGGGAAAAAGAATAGAAGGTTCTATTCTACTACAAATGACAATATTAACCTATATGGACATGCCTGGAATATATGGCAACAAGGAAGGTCTTTAGAACTGATCGATGAATGTCTCAAAGACTCTTGGAATTTATCTGAAGTACAGCGCTGCATTCATATTAGCCTACTGTGTGCGCAGCAGTATCCACAGGACAGGCCAAGCATGTCATCTGTGGTTCTGATGTTGGGTAGTGAAATTGATTTGCCTCTACCCAAATTTCCTAGTTTTTTAATTGGAGAACCTTCTGATGGCATAAGTTCCTCCTCTAGTAAAAATACATTGAGCATTACAGTGCTGGAAGCTAGATAA 1692 0.3983 MDMFLTLTLISFHVLFPNTMVSTSADNQSVHAQGTKRSGMIDDSYCSYHRVCGANGNCDLNKAPACVCLDGFTPKSPSGWDSMDYTQGCVRDKTLNCTIDVFLKYSVFQVPSGTYSLLNQSLVEEDCKEKCLRNCSCVAYTMGSGCKLWTGDLFDVRVIKEEGHDLYIRMPASELDPEEETHGHNERNMVGVIIGSTAAIISGMIICFRYMHRRSLRSKGNIRTDEIVSQGDLELPLFDLSRIAAATDNFSANNKLGEGGFGPVYKGTLDGGQQIAVKRLSRSSGQGLNEFKNEVILIAKLQHRNLVKLHGCCIQEEEKLLIYEYMPNRSLDCLIFDETQGKLLDWPKRFKIIYGIARGLLYLHQDSRLRVIHRDIKASNVLLDSEMEPKISDFGLAKSFVGGDQSKGNTNRVVGTYGYVAPEYAVNGHFSVKSDVFSFGILLLEIITGKKNRRFYSTTNDNINLYGHAWNIWQQGRSLELIDECLKDSWNLSEVQRCIHISLLCAQQYPQDRPSMSSVVLMLGSEIDLPLPKFPSFLIGEPSDGISSSSSKNTLSITVLEAR* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01197 563 Gene3D Phosphorylase Kinase; domain 1 225 325 - -
Rops7g01197 563 ProSiteProfiles PAN/Apple domain profile. 97 171 IPR003609 -
Rops7g01197 563 CDD PAN_AP_plant 94 171 - -
Rops7g01197 563 SUPERFAMILY Protein kinase-like (PK-like) 234 534 IPR011009 -
Rops7g01197 563 CDD STKc_IRAK 256 523 - -
Rops7g01197 563 Pfam S-locus glycoprotein domain 43 76 IPR000858 GO:0048544
Rops7g01197 563 MobiDBLite consensus disorder prediction 544 563 - -
Rops7g01197 563 ProSiteProfiles Protein kinase domain profile. 250 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01197 563 Gene3D Transferase(Phosphotransferase) domain 1 326 528 - -
Rops7g01197 563 Pfam PAN-like domain 98 156 IPR003609 -
Rops7g01197 563 Pfam Protein tyrosine and serine/threonine kinase 252 520 IPR001245 GO:0004672|GO:0006468
Rops7g01197 563 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 214 325 - -
Rops7g01197 563 SMART serkin_6 250 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01197 563 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 47 547 - -
Rops7g01197 563 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Rops7g01197 563 SMART ntp_6 97 170 IPR003609 -
Rops7g01197 563 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 326 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01197 Rops-Chr7 16070404 16074057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01197 212 539 Receptor kinase-like Gene Family AT4G11530 53.191 1.90e-124 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01197 PK_Tyr_Ser-Thr 9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01197 - - aip:107610641 741.88