Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01196 ATGTTAAAATCAACCACTGAAGAGACAAACAATGGACGCAAGGTCAAGGTAGGAATTGCAGTTGGAAGTGCCATAGCAATATTCTGTGGTCTGCTCTTAGCTTTCTATTTCATATGCAGAAGAAGAAGGGCCAACAGGAAAAAGAATCTAGCAGTATTGGACCATTTCAAAGAAGAACAAGAGGAAGACTTGGAGCTTCCATTGTTTGACCTATCGAGAATAGCAAGAGCCACTGATAACTTTTCAATCAGCAACAAGCTTGGAGAAGGTGGTTTTGGACCCGTATACAAGGGAACATTGGAAAATGGACAAGAAATTGCTGTTAAGAGACTTTCTAGAGGTTCTGGACAAGGGCTCAAGGAATTTAAAAACGAAATTAAATTAATAGCAAAACTTCAACACCGTAATCTTGTAAGGCTTCATGGATGTTGCATTGAGGGTGAAGAGAAGTTGCTAATATACGAATACATGCCTAACAAAAGCTTGGATTTCTTTATATTTGATCAAACACACAGAATGCTCTTGGATTGGCCTAAGCGCTTCCATATAATTTGTGGGGTTGCAAGGGGCCTTCTCTATCTTCATCAGGACTCCAGACTCAGAATCATTCATAGAGATCTCAAAGCAAGTAATGTCTTACTTGATAGTGAGATGAATCCGAAGATCTCAGACTTTGGCCTAGCTAGAATTTTGGGAGGAGACCAGAATGAAGCAAATACACTTAGGGTGGCTGGCACTTATGGATACATGGCACCGGAATATGCAATAGATGGAAACTTCTCAGTGAAATCTGATGTTTTTAGCTTTGGCATTTTGTTGTTGGAGATAGTATCTGGAAAGAAAAATGTTGGAAACCGTCATCAAGAAGAAAATAGGAACCTTATTGGACATGCATGGGATTTGTGGATAGAAGGGAGGCCTTTAGAATTGATTGGTGAATACTCCAAAGACTCTTGCAATCTCTCTGAAGCATTGCGCTGCATCCATATAAGTCTTCTGTGTCTGCAGCAGCATCCAAATGAAAGGCCTAGCATGTCTTCTGTAGTTATGATGTTAGGTGGTGAAATTGGCTTGCCTCAGCCCAAACAACCAGCTCTATTTGTTGGAGAACATGCAAAACAGGAATATACTTCATCATATAAAAATGAGTTGCCTTCTGTCAACGAACTAAGTATTACAGTTTTAGAAGCTCGTTAG 1197 0.3993 MLKSTTEETNNGRKVKVGIAVGSAIAIFCGLLLAFYFICRRRRANRKKNLAVLDHFKEEQEEDLELPLFDLSRIARATDNFSISNKLGEGGFGPVYKGTLENGQEIAVKRLSRGSGQGLKEFKNEIKLIAKLQHRNLVRLHGCCIEGEEKLLIYEYMPNKSLDFFIFDQTHRMLLDWPKRFHIICGVARGLLYLHQDSRLRIIHRDLKASNVLLDSEMNPKISDFGLARILGGDQNEANTLRVAGTYGYMAPEYAIDGNFSVKSDVFSFGILLLEIVSGKKNVGNRHQEENRNLIGHAWDLWIEGRPLELIGEYSKDSCNLSEALRCIHISLLCLQQHPNERPSMSSVVMMLGGEIGLPQPKQPALFVGEHAKQEYTSSYKNELPSVNELSITVLEAR* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01196 398 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 45 156 - -
Rops7g01196 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Rops7g01196 398 SUPERFAMILY Protein kinase-like (PK-like) 64 378 IPR011009 -
Rops7g01196 398 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 157 359 - -
Rops7g01196 398 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 398 - -
Rops7g01196 398 Gene3D Transferase(Phosphotransferase) domain 1 157 356 - -
Rops7g01196 398 CDD STKc_IRAK 87 352 - -
Rops7g01196 398 ProSiteProfiles Protein kinase domain profile. 81 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01196 398 Pfam Protein tyrosine and serine/threonine kinase 83 351 IPR001245 GO:0004672|GO:0006468
Rops7g01196 398 Gene3D Phosphorylase Kinase; domain 1 54 156 - -
Rops7g01196 398 SMART serkin_6 81 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01196 398 Pfam Domain of unknown function (DUF3403) 358 398 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01196 Rops-Chr7 16049225 16051003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01196 39 398 Receptor kinase-like Gene Family AT4G11530 52.589 4.02e-132 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01196 PK_Tyr_Ser-Thr 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01196 - - ahf:112769120 592.423