Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01194 ATGCCATCTTCTTTTGAACACACCAATGAGGGCCACAAGAAGAAAGGAGTCCTGGTGGCAGTAACAGTCTCTCTGGCCGTGGTAGTGATTTCTGTAATCATACTTGGTTTTTGTTATAGGAAGAAATCACGCTCCAATATTAAAGATAAATCAGACCTCAGTATCAATGGAGACCAAAACAGTGGAGTACAAGTGGATGATGTGGATCTACCAGTCTTTAACTTGTCAACAATAGCTAAGGCCACTAACAACTTTACAATCAAGAACAAAATTGGAGAAGGTGGTTTTGGACCTGTATACAGGGGAATCCTAGCTGATGGGGTGGAAATTGCTGTGAAAAGGCTCTCAACAAGCTCAGGCCAAGGATTGAACGAGTTCAAGAATGAAGTAAAATTGATTGCAAAACTTCAACACCGCAATCTTGTAAAACTTCTTGGATGTTGCCTTGAAGGAGAGGAAAAAATGTTGGTTTATGAATTCATGCCTAACAGTAGCCTGGACTCCTTTATTTTTGATCAACATAGAAGTGAATTACTAGACTGGTCAAAGCGTTTTGAAATTATATGTGGAATTGCTAGGGGACTTCTCTATCTTCATCAGGATTCCAGACTAAGGATAATTCACAGAGATCTCAAAGCAAGTAATGTTTTACTTGATAAAGAGTTGAATCCCAAAATTTCAGATTTTGGCATGGCTAGAATCTTTGGAGGAGATCAGAAAGAAGGAAACACAAAGAGAATAGTTGGAACTTATGGCTACATGGCACCAGAATATGCAACTGATGGGCTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTTTAATGCTGGAGATTGTATCAGGGAAGAGAAGTAGAGGATATTATAATCAGGACCATAATCTCATAGGCCATGCATGGAAATTATGGAAAGAAGGAAGACCACTAGAATTGATTGATAAAAGCCTAGAAGACTCTTGTTTTGTATCACAAGTATTGCATTGCATTCATGTTAGTCTCTTGTGTGTTCAACAGTACCCAGAGGATAGGCCTGGAATGTCATGTGTGCTCCTAATGTTAGCAAGTGAGTTTGAATTGCCTGAGCCTAAACAGCCAGGATTCTTTGGAAAAGATTCAGGTGTAGCAGAATCCTCCACAAGTAATCAGCAACAAAGTTCAACAAATGAAATAACCATTACCCTATTAGAAGCCAGATAA 1200 0.3892 MPSSFEHTNEGHKKKGVLVAVTVSLAVVVISVIILGFCYRKKSRSNIKDKSDLSINGDQNSGVQVDDVDLPVFNLSTIAKATNNFTIKNKIGEGGFGPVYRGILADGVEIAVKRLSTSSGQGLNEFKNEVKLIAKLQHRNLVKLLGCCLEGEEKMLVYEFMPNSSLDSFIFDQHRSELLDWSKRFEIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDKELNPKISDFGMARIFGGDQKEGNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLMLEIVSGKRSRGYYNQDHNLIGHAWKLWKEGRPLELIDKSLEDSCFVSQVLHCIHVSLLCVQQYPEDRPGMSCVLLMLASEFELPEPKQPGFFGKDSGVAESSTSNQQQSSTNEITITLLEAR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01194 399 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 49 160 - -
Rops7g01194 399 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 381 - -
Rops7g01194 399 Pfam Domain of unknown function (DUF3403) 358 399 IPR021820 GO:0004674
Rops7g01194 399 Gene3D Phosphorylase Kinase; domain 1 45 160 - -
Rops7g01194 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Rops7g01194 399 ProSiteProfiles Protein kinase domain profile. 85 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01194 399 SUPERFAMILY Protein kinase-like (PK-like) 69 354 IPR011009 -
Rops7g01194 399 CDD STKc_IRAK 91 354 - -
Rops7g01194 399 Gene3D Transferase(Phosphotransferase) domain 1 161 362 - -
Rops7g01194 399 Pfam Protein tyrosine and serine/threonine kinase 86 348 IPR001245 GO:0004672|GO:0006468
Rops7g01194 399 MobiDBLite consensus disorder prediction 374 399 - -
Rops7g01194 399 SMART serkin_6 85 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01194 399 MobiDBLite consensus disorder prediction 364 399 - -
Rops7g01194 399 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 161 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01194 Rops-Chr7 16016997 16022132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01194 16 383 Receptor kinase-like Gene Family AT4G23190 51.459 1.57e-137 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops7g01194 PK_Tyr_Ser-Thr 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01194 - - gmx:100778155 647.891