Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01182 ATGGCATCAGTAGCTGGAACTTTCTGCTATATTGATCCAGAGTATCAGCAAACAGGAGTGCTCAGTGTCAAGTCCGATGTTTATTCCTTGGGGATCATGTTTCTACAATTATTGGCAGGCAGGGCTCTGATGGGATTGGCTCACCATGTTGAAGAGTGTTTAGGGAAGGGCACGTTGGTGGCAATGCTGGACCCATCTCTCACGGACTGTCCTCTTGAAGGCAGCCATCTTCCTAGTAGCTTCCCGTTGCCCTCTCTCTCTCGTGGGCTCTCAAAGCATGGGTGCAAAAAGCATGCAACGTGCATGAATATGGAGATGGTGCTGCCTACACTTCTCGAACTCTATCAACGCACCGCAGCTGCTTATCTCAGACGTCAGCCTTCCACCATCCTGCCCTGGACCAAAGACGCTCATTTGGGAATTACTCAAATGCTGCATTGCACTCCGGCAGAGAAAGGCGATTTTCTTCTTGACTTTCTCGTGGGTGTTGTTTCGGCTGCTGTCTCCAAAACTGCTGCTGCCCCCATTGAACGTGTTAATCTTTTGATCCAGAACCAGGATAAGATGATCAAATCTGGCCGGCTTTCTGAGCCCTACAAGGGTGTGGGTGATCGTCTTAAGAGAACAATGAAGGATGAGGGTGTTGTTGCCCTATGGAGAGGTAGCACTGCAAATGTCATCCGTTATTTCCCCACTCAGGACAGACCAACTCCCAAAATGATTGAAGTCCTCGGTGATGTTGGTTCTGTTGTTCAGATTGCAGCTGGACCAAGCTATATCTTATCTGTAACGGAGGATGGTGCAGTATACTCCTTTGGATCAGGTGCTAATTTCTGTCTTGGCCATGGTGAGCAACACAATGAGTTTCAGCCACGTGCTATACAGAAATTTAAAAGAAAATGTATCCATGTTGTCCGTGTATCTGCTGGGGATGAGCATGCAGTGGCACTTGATTCGAATGGATTTGTATATACATGGGGCAAGGGATACTGTGGTGCTTTAGGTCACGGAGATGAGATTGAGAAGACAACACCAGAGATCTTGACTAGTCTTAAGAGTCACTTGGCTGTTCAGGTCTGTGCAAGAAAGAGGAAAACCTTTGTTCTAGTTGACTCCGGTTCGGTCTATGGCTTTGGCTCCATGGGATTTGGTAGCCTTGGATTTTTGGATAGAATCTTGAAACCTCGAATGTTAGATACATTGAGAGCACACCATGTTTCTCAAATTAGCACTGGCTTGTACCACACTGTGGCACCACACACATACGGGTTTATGGGTGGTGTTATTTACGTGAGTGAAATATGTATATAA 1311 0.4668 MASVAGTFCYIDPEYQQTGVLSVKSDVYSLGIMFLQLLAGRALMGLAHHVEECLGKGTLVAMLDPSLTDCPLEGSHLPSSFPLPSLSRGLSKHGCKKHATCMNMEMVLPTLLELYQRTAAAYLRRQPSTILPWTKDAHLGITQMLHCTPAEKGDFLLDFLVGVVSAAVSKTAAAPIERVNLLIQNQDKMIKSGRLSEPYKGVGDRLKRTMKDEGVVALWRGSTANVIRYFPTQDRPTPKMIEVLGDVGSVVQIAAGPSYILSVTEDGAVYSFGSGANFCLGHGEQHNEFQPRAIQKFKRKCIHVVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPEILTSLKSHLAVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRILKPRMLDTLRAHHVSQISTGLYHTVAPHTYGFMGGVIYVSEICI* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01182 436 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 321 372 IPR000408 -
Rops7g01182 436 Pfam Mitochondrial carrier protein 155 233 IPR018108 -
Rops7g01182 436 PRINTS Mitochondrial carrier protein signature 221 241 IPR002067 GO:0055085
Rops7g01182 436 PRINTS Mitochondrial carrier protein signature 158 171 IPR002067 GO:0055085
Rops7g01182 436 PRINTS Mitochondrial carrier protein signature 171 185 IPR002067 GO:0055085
Rops7g01182 436 SUPERFAMILY Protein kinase-like (PK-like) 3 52 IPR011009 -
Rops7g01182 436 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 267 320 IPR000408 -
Rops7g01182 436 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Rops7g01182 436 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 307 317 IPR000408 -
Rops7g01182 436 Pfam Regulator of chromosome condensation (RCC1) repeat 266 317 IPR000408 -
Rops7g01182 436 Pfam Regulator of chromosome condensation (RCC1) repeat 320 361 IPR000408 -
Rops7g01182 436 Gene3D - 202 425 IPR009091 -
Rops7g01182 436 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 246 IPR018108 -
Rops7g01182 436 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 373 422 IPR000408 -
Rops7g01182 436 SUPERFAMILY RCC1/BLIP-II 232 419 IPR009091 -
Rops7g01182 436 PRINTS Adenine nucleotide translocator signature 199 220 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops7g01182 436 PRINTS Adenine nucleotide translocator signature 155 167 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Rops7g01182 436 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 226 418 - -
Rops7g01182 436 SUPERFAMILY Mitochondrial carrier 153 233 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01182 Rops-Chr7 15730093 15731483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01182 148 233 Antiporters AT3G08580 78.409 1.02e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01182 - - lang:109357264 337.806