Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01174 ATGCCAACTACGTGGTTCTCTCTGAAGAGGTCTTTACACTGCAAATCAGAGCCATCAGATGTTCATGTTCCAAAAACAAGGAAGCACTTGACCACAATCTTGACTAAAAGAGCAGGGACAACAGGTAGGTCAGGTTGTTCAAGGTCCATAGCAAATCTCAAAGATGTTATCCATGGAAGCAAGAGGCATTTAGAAAAGCCACCAAGTTGTAGCCCAAGATCCATAGGGAGTAGTGAGTTTCTTAATCCAATTACCCATGAAGTGATTTTGAGTAACTCAAGGTGTGAGCTGAAAATTACTGGATATGGAGGAGGATTCCAAGAAGGGGTTGGTAGTGATGGTGGAGGTGGTTGTAATAATGGTGATTCAACCTTTGTGGGTACTTTAAGACCTGGGACTCCTGGCCCTGGAGGGCACCCTACAATGCACTATTTCAACCCTTCTTTTAGGACTTCATCCACTCCTCCAAGGAAATCTCCTTTCCTTTCATCAGATAAAGAAGGCTCTAACTTGCACGGTGTTGGACTTCATTCAAGCAATAGGTTGTCTCTTGAGACAGATTCTCATGGTTCTTCTACCGTGACTTGCCACAAATGTGGTGAGCAATTTAACAAATGGGAAGCTGCTGAAGCTCATCATCTCTCCAAGCATGCTGTTACTGAACTTGTGGAAGGTGATTCATCAAGAAAAATAGTGGAGATAATATGCAGGACGAGCTGGTTGAAGTCTGAAAACCAATGTGGTAGAATTGAAAGAGTTTTGAAAGTCCATAACATGCAAAAGACTCTAGCTCGGTTTGAAGAGTACAGGGAGCTGGTGAAAATCAAAGCCAGCAAACTCCCCAAGAAGCATCCTAGGTGTCTTGCTGATGGGAATGAGCTTTTGAGGTTCTATGGCACCACTGTTGCTTGCTCTCTTGGTCTCAATGGTTCTTCTAGTCTTTGCCTATCTGAAAAATGCTGTGTTTGTAAAATTATTAGAAGTGGTTTTTCTGCCAAGGAGGAGCTCAAGGGTGGAATAGGTGTTTTCACTACTTCCACAAGTGGAAGAGCTTTTGAATCTGTTGAGATTTTTGACCATGACCCATCACTTAGAAAAGCATTGATAGTATGCAGAGTAATTGCTGGCAGGGTTCATAGACCTCTGGAGAACATTCAGGAAATGGCAGGTCAGACAGGTTTTGATTCATTGGCTGGAAAAGTTGGTCTCTATTCAAACATTGAAGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTAATTTGCAAACCCTGA 1287 0.4266 MPTTWFSLKRSLHCKSEPSDVHVPKTRKHLTTILTKRAGTTGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGGFQEGVGSDGGGGCNNGDSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLSSDKEGSNLHGVGLHSSNRLSLETDSHGSSTVTCHKCGEQFNKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYRELVKIKASKLPKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCKIIRSGFSAKEELKGGIGVFTTSTSGRAFESVEIFDHDPSLRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01174 428 SUPERFAMILY ADP-ribosylation 219 427 - -
Rops7g01174 428 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 426 - -
Rops7g01174 428 MobiDBLite consensus disorder prediction 149 166 - -
Rops7g01174 428 Gene3D - 209 427 - -
Rops7g01174 428 MobiDBLite consensus disorder prediction 149 174 - -
Rops7g01174 428 ProSitePatterns Zinc finger C2H2 type domain signature. 196 217 IPR013087 -
Rops7g01174 428 FunFam C2H2-like zinc finger protein 218 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01174 Rops-Chr7 15593750 15595977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01174 1 428 C2H2 Transcription Factor Family AT5G54630 67.387 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Rops7g01174 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01174 - - gmx:100800127 756.518