Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01172 ATGCGTTCTATAATTACATGTTCTGCATCTAGTCGTTGTAAGTGGGTTCTGCTGGGTTGCTTTGGTGAAATAGGTCTCCCTCCACTAGCGCAATCTTCTTTTGATCCTATCCATGTAAGTGGCCAAATCCCATCGGCATTTGTGTTGAGTACACCATTTATCCTTCAGAACCATCTCAATCTGGTTCTAGTGAACAACGTGCCTATATCCTGGTTCGATTTGAAATTGTTGCATCGTTCTTCTGCAGCGATTGGAATAGTTGGACGAACTGGCAGTGGAAAATCTACTTTGATTCAAGCATTATTTCGATTGGTTGAACCGGCATCTGGGAGTATCCTTATAGACAACATCAATATTTCAGGGATTGGTCTTCATGACCTTCGAAGCCATTTGAGTATCATACCACAAGATCCAATCTTATTTGAAGGCACCATTTGA 438 0.4155 MRSIITCSASSRCKWVLLGCFGEIGLPPLAQSSFDPIHVSGQIPSAFVLSTPFILQNHLNLVLVNNVPISWFDLKLLHRSSAAIGIVGRTGSGKSTLIQALFRLVEPASGSILIDNINISGIGLHDLRSHLSIIPQDPILFEGTI* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01172 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 145 IPR027417 -
Rops7g01172 145 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 82 145 - -
Rops7g01172 145 Gene3D - 61 145 IPR027417 -
Rops7g01172 145 Pfam ABC transporter 80 144 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01172 Rops-Chr7 15570824 15572825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01172 73 145 Calmodulin-binding Proteins AT2G36910 41.096 6.78e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01172 - - gmx:100814850 118.242