Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01166 ATGAAGCACTTTGGAATGGCAATTCAGCAACATATAGGTGTCATAAAGACTTGCTTTTGCATTGTTTTGGTTCTTAATGTTGTGGCAGCCGTCAGCATTGAAGAAAAGAAGGAAACACAAGAAGAATTCCTTGGCCAACTATTTGATCAGGCATCTGGAGTGTTAGATAAGGACACGGCAGAGGTACTATGGACCACTTGCTTGGAAGATTTGGTTCATTTAAAGAAAGAAAATGGAGATCATGACTTTTGCCTCCCAAAGGAATCACCCAGTAGCCCTAATGAAATTAGTTCAGAAACTGGATCAATAACAAGACAAAACATCCAAAAATTGATTAATACATGCCATCCTCAGTTGAAGGAAAAGTTTCTTCACTGTTTGAGAAAAAAAAAGTTTCCATTCCATGTCTCTCGAGAGAAAGATGACTCCAAGATTTGGCATGCCCCTTATATGGGATCACTTTCTTCCAGAAGATATCTTGGTCATGTTTTCCAGCACGAATCAGAAACATCAGACAAAGAAGATGGATCGTCTATAAAACAAAGTTCTAAAGATCAAGACCCAGATAAAAAAAAGAAAAAAAAGTCCAAGTCTGATAAGCATAGCGATCACAAAAAACAAGTTTATAATGCCATAGCTATAACTGCAGTGGTGACAATTGTAGGTGCAGCACTGCTCTTTTGTTGCTGTTGTAAGTGTTGTGGGAGTGGCCGAGTTAGCCAGAATGATGAGAGGCCCCTTCTCAGCATGAGCATGAGTGACTATTCTGTTGGTTCTTCTTCCAATAATAACCCGTATAAAAGTTCACTAAATGACAATACTTTGGTTGATGACAAGAAGAACTCAGTGCAGGAAATTCAAGTAGCAGGAGTTGCTAGTGCTGCTGCAAGACCATCATTTGAACTTAAGCCTCCACCTGGGAGGGCAGGAACTGGAATGCCTCCTTTGAAACCTCCTCCTGGTAGGCCTGATCCTCTCCCTCCTGAACCACCTTCAATTAAGCCTTCTGATAATGCCACTACTGCTGCTGCTCCTCCTACTCCTCCTCCTGCACCACCAAGGCCTGGTAGTGGTGGCCCTCCACCTCCTGCACCCCCACCACCAGGCGGTAGTGGCCCTCGGCCTCCTCCACCACCACCACCTCGTGGTCCTCGTGCACCACCACCTCCTAGGGGTGGTATAGGTCCTCCAAAAGCTCCTCCACCAATTGGACCAAAGGGGGCTAGACCTTTAGCTAGTGGACTAAAGGGTCAAGGGAATGCTAAAGCTAGTTCAGAAGGTGAAGCTGATGCTCCCAAAGCTAAGTTAAAGCCATTTTTCTGGGATAAGGTTCAAGCCAACTCAGATCAATCAATGGTTTGGAATCAGATCAAAGCAGGATCATTTCAGTTTAATGAAGAAATGATGGAAACGCTTTTTGGCTATAGTGCTCCACCTGGGGATAAAAACAAAGGTGCACAGAAGAAACAGACTTCTTCCCAGGATGCTTCACCTCAGTATATCCAGATTATTGACTCAAAGAAAGCACAAAATTTATCGATTCTGTTGCGAGCATTGAATATAACACTGGAAGAAGTTTGTGATGCACTTCTTGAAGGAAATGAGCTCCCCACAGAATTCCTTCAAACCCTGATGAAGATGGCACCAACGCAAGAGGAAGAACTTAAGCTTAGACTTTTCAGTGGTAACCTTTCCCAGCTTGGGCCCGCTGATCGGTTCCTGAAAACCCTGATTGAGATTCCATTGGCTTTTAAACGAATGGAAGCACTTCTTTACATGGGGACTCTTCAAGAGGAACTCACTGCTACTCGGGACTCTTTTGCAACTTTAGAGGTTGCTTGTAAGGAACTAAGAAGCAGCCGATTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGGAACCGTATGAATGATGGGACATTCCGTGGTGGTGCACTAGCATTTAAACTTGATACACTACTGAAATTATCTGATGTAAAAGGAGTAGATGGCAAGACTACTCTCTTACACTTTGTTGTTCTAGAGATAATCCGAACTGAGGGCATAAGAGCCGCTCGTATGGCAAAAGAGAGCCATAGTTTCTCAAGTATAAGAACCGAAGAGCTTCTTGAGGACATTGGTCATGAATCAGAAGAACACTATCGTGAACTTGGTCTTCAAGTGGTTTCACGTTTGAGCAGTGAGCTTGAGAATGTGAAGAAATCAGCAGCTCTAGATGCTGATGGCTTAACGGGAACAACTGCTAGACTAGGCCATGGTCTCATAAAAACTAAGGACTTTGTAAACGAGGACATGAATAACATAGAGGATGATAAAGGGTTTCATGAAACGGTTAAGAGTTTTGTGGAGAAAGCTGAGGTTGACGTCACAAGTCTGCTTGAAGAAGAGAAGAAAATCATGGCTCTTGTGAAGAGCACTGGTGATTACTTTCATGGGAATTCTGGGAGGGATGAAGGCTTAAGATTGTTTGTAATAGTACGTGATTTCTTAATAATGTTGGATAAGGTATGCAAGGAGATTCAAAAGGCACCAAAGAAGCCAACAAAACCTGTGAAAAAAGATAATACTTCTAGTTCTAGAGGGTCATCTTCCTCTGACACTCGTCCACGGCCTGCTGATTTTCGCCAAAGGCTTTTTCCAGCAGTAGCAGATAGGAGGGTGGATGATTTTAGTTCAGATGATGAGAGTCCATAG 2697 0.432 MKHFGMAIQQHIGVIKTCFCIVLVLNVVAAVSIEEKKETQEEFLGQLFDQASGVLDKDTAEVLWTTCLEDLVHLKKENGDHDFCLPKESPSSPNEISSETGSITRQNIQKLINTCHPQLKEKFLHCLRKKKFPFHVSREKDDSKIWHAPYMGSLSSRRYLGHVFQHESETSDKEDGSSIKQSSKDQDPDKKKKKKSKSDKHSDHKKQVYNAIAITAVVTIVGAALLFCCCCKCCGSGRVSQNDERPLLSMSMSDYSVGSSSNNNPYKSSLNDNTLVDDKKNSVQEIQVAGVASAAARPSFELKPPPGRAGTGMPPLKPPPGRPDPLPPEPPSIKPSDNATTAAAPPTPPPAPPRPGSGGPPPPAPPPPGGSGPRPPPPPPPRGPRAPPPPRGGIGPPKAPPPIGPKGARPLASGLKGQGNAKASSEGEADAPKAKLKPFFWDKVQANSDQSMVWNQIKAGSFQFNEEMMETLFGYSAPPGDKNKGAQKKQTSSQDASPQYIQIIDSKKAQNLSILLRALNITLEEVCDALLEGNELPTEFLQTLMKMAPTQEEELKLRLFSGNLSQLGPADRFLKTLIEIPLAFKRMEALLYMGTLQEELTATRDSFATLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGALAFKLDTLLKLSDVKGVDGKTTLLHFVVLEIIRTEGIRAARMAKESHSFSSIRTEELLEDIGHESEEHYRELGLQVVSRLSSELENVKKSAALDADGLTGTTARLGHGLIKTKDFVNEDMNNIEDDKGFHETVKSFVEKAEVDVTSLLEEEKKIMALVKSTGDYFHGNSGRDEGLRLFVIVRDFLIMLDKVCKEIQKAPKKPTKPVKKDNTSSSRGSSSSDTRPRPADFRQRLFPAVADRRVDDFSSDDESP* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01166 898 MobiDBLite consensus disorder prediction 342 407 - -
Rops7g01166 898 MobiDBLite consensus disorder prediction 474 497 - -
Rops7g01166 898 MobiDBLite consensus disorder prediction 290 432 - -
Rops7g01166 898 MobiDBLite consensus disorder prediction 253 274 - -
Rops7g01166 898 ProSiteProfiles Formin homology-2 (FH2) domain profile. 426 860 IPR015425 -
Rops7g01166 898 MobiDBLite consensus disorder prediction 166 193 - -
Rops7g01166 898 MobiDBLite consensus disorder prediction 855 870 - -
Rops7g01166 898 MobiDBLite consensus disorder prediction 880 898 - -
Rops7g01166 898 MobiDBLite consensus disorder prediction 308 334 - -
Rops7g01166 898 Pfam Formin Homology 2 Domain 428 834 IPR015425 -
Rops7g01166 898 Gene3D Formin, FH2 domain 431 868 IPR042201 -
Rops7g01166 898 PANTHER FORMIN-RELATED 144 893 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops7g01166 898 SMART it6_source 426 849 IPR015425 -
Rops7g01166 898 MobiDBLite consensus disorder prediction 166 204 - -
Rops7g01166 898 MobiDBLite consensus disorder prediction 843 898 - -
Rops7g01166 898 SUPERFAMILY Formin homology 2 domain (FH2 domain) 375 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01166 Rops-Chr7 15546182 15552296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01166 396 841 FH2 protein (formin) Gene Family AT3G25500 46.304 2.56e-120 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01166 - - gmx:100782988 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01166 7 15546182 15552296 Rops7g01166 7 15546182 15552296 ECH
Rops7g01166 7 15546182 15552296 Rops3g01658 3 25960734 25975751 PCT