Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01143 ATGAAGGTAGCTTCCTCATACATAATACTTTTGTTGTTCCTGTTGTCAAGCTTGGAGATTTGTCATGGACAAGATTCCGAGCTGGCCTCGCCGCCGCCTCCGATGTCGGAGCTCGACAACTGCGACGGGGTATTCTTGACGTACAGTTTGTTGTCACGTGAGAAGGAATATCCGCACGTGAAGAACGTGTCAAAGCAAGCGTGGGCATTTAAGGCAGAAGCTTCTTTGATGAATGTTGGAGATGAGGAACTTATGGGGTGGAAGATGTTTATTGGGTTCCAACATAGGGAGATTTTGGTGTCTGCAGATGGTGCTGTTCCCATTGATGCTGAGGATTTTCCAGCGGAGGTGGGGAATGGGACCACCATTGCCGGTAACGCCATGACGGACTTGAAGACCGCCATTGATACCGCCGGAGATTTTAACCAGATGGCGGTGAGGATTCAGATGAGTGGCACGCAGTTTGGACTTGGTGCCAGTGCCACCCCAATGCCCAAGACTATTAAGCTCATGAATGATGGCTTCAAATGCCCTGCACCTAGTCGTAAAGGGACAAGAATGTTTGTATGCTGCAGAAAAGACCCCAAAGCCAAGGCCAAGCTAGCCAAGAAAACCAAGTTCCTTCCTCGTCGCTATGGAGATTTGACAATTGCATATGATGTGCTTCAAGCCTTTCAGAACAACTACTATGCCCAAATCACTATTGACAACAACCACCCATTGGGTCGTCTTGATCATTGGAACTTGACATGGGAATGGCAAAAGGGAGAGTTCATTTACTCCTTGAAAGGAGCTTATGCTCGCATAAAGGACATTTCAGAATGCTTGTATGGTCTTGCAGGTCAGAACTACAAGGACATGGATTTCTCACAAGTTGCAAACTGTCAAAAAAAGCCTATTCTATCTGATCTTCCTTCTGAAAAAAGAGAGGATGAGAAAGTTGGAAAATTACCTTGGTGCTGCAAGAATGGCACTGTGTTACCACCTATCATGGACAAGAACAAAGCAAGGTCCATTTTTCAGATGCAAGTTTTCAAGATGCCAACTGATGATAACAGAACTGCTTTCACCCCTCCTATGAAGTGGCACATTGATGGTGTTATCAATCCAAAATACACATGTGGACCTCCAATTAGAGTTGACCCACAAGAGTTCCCTGACCCAAGTGGGCTTAAAGCAGTTACCACTGCAGTGGCCAGTTGGCAAATAGTTTGCAACATCACCAAACCAAAGCCTCAACAAAACCGTTGCTGTGTCTCATTCTCAGCATTCTATAATGAATCTGCCATCCCTTGCAACACTTGTGCTTGTGGTTGTGATGACACTAGGAAGTGCAACCCCAATGCTCATTCATTACTTCTGCCACCTGAAGCTCTTCTTGTGCCTTTTGCTAATAGAACTATAATGGCAAAAGCTTGGGCCAAACTCAAACACTTGCATATGCCAAACAGATTGCCTTGTGGAGATAACTGTCCTGTTAGCATCAACTGGCACGTAAGCTCAGATCACAAGGATGGATGGACAGGTAGGATCACACTTTTCAATTGGGAAAGCTATGCCTTTGAAGATTGGTTCACGGCATTGCAGTTCAAGAAGACTTTTCAAGATTTTGAAGATGTGTATTCCTTCAATGGGACTAGAATTCCTGGTCTTAAAACCATCTTCCTCCAAGGCCTAAAGGATATGAATTACTTGGCTGGAGAGACCAATGGAACCCATGCTAAAGATCCAAGGGTGCCTGGAAAGCAGCAATCTGTGGTTACTTTCAATAAGAAGAAGCTTAAAGACTTTGATGTTACACGTGATGCATTCCCAACTAAGGTGTTCTTCAATGGAATGGAGTGTGCACTTCCTCCAAGAACACCTGCAAAGAGTTCAGGGCATCAATCTTCCATCAATGTCCTTGCAGTCATTTTCACAGCATTTATGACATTTTTGCTGATGACAGATCGCTTTTACTGA 1962 0.4465 MKVASSYIILLLFLLSSLEICHGQDSELASPPPPMSELDNCDGVFLTYSLLSREKEYPHVKNVSKQAWAFKAEASLMNVGDEELMGWKMFIGFQHREILVSADGAVPIDAEDFPAEVGNGTTIAGNAMTDLKTAIDTAGDFNQMAVRIQMSGTQFGLGASATPMPKTIKLMNDGFKCPAPSRKGTRMFVCCRKDPKAKAKLAKKTKFLPRRYGDLTIAYDVLQAFQNNYYAQITIDNNHPLGRLDHWNLTWEWQKGEFIYSLKGAYARIKDISECLYGLAGQNYKDMDFSQVANCQKKPILSDLPSEKREDEKVGKLPWCCKNGTVLPPIMDKNKARSIFQMQVFKMPTDDNRTAFTPPMKWHIDGVINPKYTCGPPIRVDPQEFPDPSGLKAVTTAVASWQIVCNITKPKPQQNRCCVSFSAFYNESAIPCNTCACGCDDTRKCNPNAHSLLLPPEALLVPFANRTIMAKAWAKLKHLHMPNRLPCGDNCPVSINWHVSSDHKDGWTGRITLFNWESYAFEDWFTALQFKKTFQDFEDVYSFNGTRIPGLKTIFLQGLKDMNYLAGETNGTHAKDPRVPGKQQSVVTFNKKKLKDFDVTRDAFPTKVFFNGMECALPPRTPAKSSGHQSSINVLAVIFTAFMTFLLMTDRFY* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01143 653 PANTHER COBRA-LIKE PROTEIN 7 4 648 - -
Rops7g01143 653 Pfam COBRA-like protein 229 408 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01143 Rops-Chr7 15287819 15291488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01143 8 650 COBRA Gene Family AT3G20580 60.122 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01143 - - gmx:100789175 1095.88