Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01142 ATGTTCAGTTTGATTCAAAGAAAACGTGGTCAAAGCACGAAAACGTCGTATCGCATGACGTTTTTAACACAAAGTCCAATTGTACTAAAAACGTCAAAATTCGTGGCGTTTTTAGTGCAAACTTGGTTTCCCCACATTGATCTCCGCATCCTTGACCCTCTCCTTTCATACCCTTCCACAGTTCTGGGCCGTGAGAAAGCCATCGTCATCAACTCAGAGCACATCAAAGCCATCATTACATCACATGAGGTTCTCCTCCTCAATTCTAGGGACCCTTCCGTAACCCCTTTTGTCGACGAGCTCCGCGCCAGGATCCTCCGTCATCACCAGGCCACCACTCCCCATCATCCAGACTCTTCCACCGACCCTAAACTCATACAACCAAATCAAGAGCCTTAA 399 0.4712 MFSLIQRKRGQSTKTSYRMTFLTQSPIVLKTSKFVAFLVQTWFPHIDLRILDPLLSYPSTVLGREKAIVINSEHIKAIITSHEVLLLNSRDPSVTPFVDELRARILRHHQATTPHHPDSSTDPKLIQPNQEP* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01142 132 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 28 108 IPR039204 -
Rops7g01142 132 MobiDBLite consensus disorder prediction 111 132 - -
Rops7g01142 132 Gene3D - 4 89 - -
Rops7g01142 132 MobiDBLite consensus disorder prediction 116 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01142 Rops-Chr7 15286996 15287394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01142 36 120 MRS2 Gene Family AT3G19640 69.412 2.70e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01142 - - mdm:103415221 124.02