Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01140 ATGGCTACCATCATTTTAAAGTCTAATGAAGTAGTTCATGCTTTGGTCATGTTCTGTCTCCTGCTATTGGTGCACAAAGGTGATGCCTATGAATTTGTAGTTGGAGGCCAAAAGGGTTGGAGTGTTCCAAGTGACCCCAATTCCAACCTTTACAATCAATGGGCACAAAAGAGCCGATTTCAAATAGGAGACTCCCTAGTGTTCAATTACCCTTCTGGCCAGGACTCAGTAATTCAAGTAAATAGCCAAGACTATGCCAGTTGCAACACTGATGCATCTTCTGAAAAATTCTCTGATGGCCACACAGTCATCAAACTCAATCAATCTGGGTCTCACTTCTTCATTAGTGGAAACAAAAATAGCTGTCTCAAGAATGAGAAGCTGGTGGTGATTGTGCTTGCTGAGAGAACCAACAGAAACTCAAACACCAACCAAACAAACACTGCTCCTTCACCTTCTCCTTCACCCTCAATCTCAACAGAATCACCAGCTCCTTCACCAACACATGTTCAGCAAAATGTTCTATCTCCAGCACCTTCTCAGCAAGAGGCTTCATCTCCACCACAGCCTTCATCTCCACCACCAGGGACAGGGGTGACAAACCCAACTCCAGCTCCTGTTAGTGAACCTCCTCCTCCTAATGCTGCTTCTTCAATCTTGGTCAACTTTGCTGGTTCTGTTGGAATGTTCATGGCTTCAGTTCTGGTTTTATCTTTCTAA 720 0.4417 MATIILKSNEVVHALVMFCLLLLVHKGDAYEFVVGGQKGWSVPSDPNSNLYNQWAQKSRFQIGDSLVFNYPSGQDSVIQVNSQDYASCNTDASSEKFSDGHTVIKLNQSGSHFFISGNKNSCLKNEKLVVIVLAERTNRNSNTNQTNTAPSPSPSPSISTESPAPSPTHVQQNVLSPAPSQQEASSPPQPSSPPPGTGVTNPTPAPVSEPPPPNAASSILVNFAGSVGMFMASVLVLSF* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01140 239 CDD OsENODL1_like 30 133 IPR041846 -
Rops7g01140 239 MobiDBLite consensus disorder prediction 162 182 - -
Rops7g01140 239 PANTHER BLUE COPPER PROTEIN 30 158 IPR039391 GO:0009055
Rops7g01140 239 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Rops7g01140 239 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Rops7g01140 239 MobiDBLite consensus disorder prediction 139 216 - -
Rops7g01140 239 FunFam Early nodulin-like protein 9 30 145 - -
Rops7g01140 239 MobiDBLite consensus disorder prediction 183 213 - -
Rops7g01140 239 Gene3D - 30 146 IPR008972 -
Rops7g01140 239 MobiDBLite consensus disorder prediction 139 155 - -
Rops7g01140 239 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01140 Rops-Chr7 15269216 15270889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01140 17 220 Phytocyanin Superfamily AT3G20570 44.118 3.71e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01140 - - gmx:100788637 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01140 7 15269216 15270889 Rops7g01140 7 15269216 15270889 ECH