Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01129 ATGCAGATTGCTGAGCCTATAATGAAACTATATACAGAGGCATCTGAATCTGATGGTTCTAGCATTGGAAAGGAGGAAAGTGCTTTTGTTGACTCCTTCGTAATCCCTAAACTCCTTCCGCTTACATTCAAAAGCATCTCCTCTTCTCCTGCTTCCATTGATCGGAAGGCTCAAGCCAAGCTTCTTTTCGTGGTGGAAGAAGATATGGACTCAAACTCAAAACGTAAAGATAAGCCATTCTCATGGAGATACTTGTTCAAACCTCGTCGGCCATCTTCTGATCTGAACCCCTCGGGCCCGGGAGGCACAACTTCCAGTATCCAAAGAAGTTTGCCATCTTCCGATCTGAGCCCATCGGGCCAGGGAGGCACAGCTTCCGGTATCCGAAGAAGCGTGCCATCTTCCGATCTGAGCACATCGGGCCAGGGAGGCACAACTTCCAGTATCCTAAGAAGTCTGCCATCTTTCGATCTGAACCCGTTGGACCAGCAAGGGACGACTTCCAACCCCTCAGGCCAGGGAGTTACAGCTTCCAGTTCTTCCATGGATTCTCATTCCCATGGCATACAAAGAAGCCCCTCATCGCGGCGTCTACATAGATACGATGTGTTTATTAGTTTCAGAGGTCCCGACACTCGCAATACTTTTGTTGATCATCTGTATAATCATCTCATCAGAAAAGGTATTGTCGTCTTCAAGGATGACATAAGGCTCCAGAAAGGAGAATCCATTTCTCCTCAGCTTCTACAAGCAATTCAAGATTCACGGCTTTCTATTGTTGTCTTCTCCAAAAATTATGCTGAGTCAACATGGTGTTTGGATGAATTGGCTGCTATTGCTGAATGCCGTAGAGATTTGAAACAAATTGTTTTCCCTGTTTTCTATGATGTTGATCCATCTCATGTACGAAACCAGAGTATGGTGGGTGGGATTTCCTTCTTTATAGTCATAGATGATCGTAGATGGAAGAGACAGAGAGCTATAAGGGATTTGGCTGGATTAGCTGGTTGGCATGGAACGGATAATGTGGAAGCTATAGTTCTAGATCAAAAAGAGAATGTCTTGAAATGCAGTGCTGAAGGGTTTTCAAAAATGAAAAGTCTTAAATTGCTCATATTATATGATGAGAATTTTTCAGAGATACCCAATTTTCTTTCCAATAATCTACTGTATCTTTTGTGGCATGGTTATCCATTTCCCTTTTTGCCACCGAAGTTTGAGCCGTACTATCTTGTGGAATTGAATTTGCCTCATAGTAGCATCCAACATCTATGGAAAGGCTGCAAGCATCTCCCCTGTCTGAAAAGGATGGATCTGAGCAACTCTAAGTGTTTTAAGGAGACTCCAAGTTTTGAAGAGATGCTAAACCTTGAGCGTTTAGACCTTACAGGATGCACAAACTTATTACAGGTCCATCCATCAATTGGACTTCTAACAAAACTTGCTTTCTTGAGTTTGAGAAACTGCAGTAGTCTGGTGAGCCTCGATTTTTGCACTACATCTAATTTAAGTTCTCTAAAAGTGCTACAACTCTCTGGTTGCTCAAAACTTCAAAATACCTCTTTGGTAGGGGCCTCAAATCTTGAGTACCTTGATATGGATCGATGTACAAGTTTATCCACAGTTCATGAATCTATGGGGGCTCTTGCAAAGCTTAGATTCTTGAGTTTAAGGGATTGCACAAATCTCGTCAGTATACCCAACAACATCAATACCATGACATCCATGATAACTCTAGATTTATGTGGTTGCTTTAGACTTAAGAATCTGCCTTTGACACAGAATTTCAATTCTTGTGGTCTGAAATCTTTGATTTTTATGGATGTAAGCTTTTGCAATCTACTTGAAGTTCCTGATGCAATTGGAGAGTTGAGGTGTTTAGAAAGACTAAATCTACAAGGAAACAACTTTGTTTCGATAACTTCTGCCATCAATAAGCTTTATCGTCTAGCATATTTAAACTTGGCTCATTGCCATAAGCTTGAATTTTTGCCAAAGCTCCCTTTAGTAAATGCAACAGCAGGGGGAAGGGAGCTTTTGTTTTTAGGAAAGGATATTATGGGTCTGAGTGAGGGGTCTGTGGAGATTTTGGATGTTGTTGGTGGCGATGACGGTGGTTCGCCGTCGGCTCACGGTGAGGAGAGTGCGACGGTGAGCGACAGCATGGATTCTTTTGAAGCTGCAATGGAGGTTCCCGGTGCTTCACCGCCACCGGAGAGTGTCAATGAGGAGGAGATTGGGAACGAGGAGGAGGTCGGAAATGAGGAAGGCAGCAGCGACCGACCGCGCTCTGCTTTAGTGTTTCACAAGAAAAGAAGGCCGAAAGAAATGGAACCTCGTCCGCTATCTGACTGGGTAGATGGTAGTGTGCTTAGGATTGAATCTAAGCTGCAAAATAGGGATGAGGTGGAGCGCATACTGAAGGCTCATCCAGACTTAGTTAGGGCCGAGGTCATTGTTGAGCCCTGTACTTCTGAAGATCGGATATGTTTACCTAAGGATGACGCCGTGGAGGCCGACTTCATATATTTTTATGAGGCTCTGCTCGGACGGGTTAGAGTAGGAATCCCCTTTTCTGACTTTGAGGTTAGTATCTTGAATACTATGAACGTTGCCCCCACTCAACTGCATCCCAATAGTTGGGCTTCTGTGAGGTGTTTTGAGGCTATTTGTGGGTATTTCGAGGACGGCAAGTCTTTGTTTCCCTTATACTGGACTCCTAACCCAAAGCCCATCAAAGGAGTGGACGCTGATTTGATGAATGAGTCTGATCGGATTGAAATGGAGTTTTTGTTAGAGTTGGATCCACTTGAGGCTTCCAGAATTATTCCCTGCATTGGTAAACCCAAACGGTTTGCAGGGTATATGAGAGGAATGGCGAAGCGGGTTTCCAAGGCCGATCTTGTGAAGAGGTTGGAGCAAGGAACGGCGAGACCGACTAGGAGCTCGGCAGCCCCTCCAGCTAAAAAGCAGAAAACAACCGAGCCGGCCACTTCTTCGGGCGTGACCCCGATAACGACGTTGAGGCCAGTCGGCGAGGTTCAGGCCGTGGTCTCACCAGCACAAAGTCAGCCCGCTCTGGGACCTGTAATTCCCCCGTTGACTCCTCAAACCGTGCCGGACATTATCCTGTCCGAGCAGAACACTGTTCACTGGCTGCCTATATCTGAGCCTTCCTTATTTAGGAGCGACTTCAGGGCGGATCTGCTGGTTGACAACCATCTGCGCACGCCCCATGATGAACAATTATTTCGCCAGATGGGGAATAAGGGTTTAACCCGGGCTGTAGAGACTAATCTTGCCCGGTCCATGTCCATGGTGCGGCAGATGGATATGAACTACCGGGCTGTCGAGGCTGCTTGCATCCAGATGAGGAAAGAGAGAGAAATCTTGAAAAAGAGGACTGCCGAGCTAGAGGGGGATGCTGCCCGGGTGAAAAGCTTGGAGGAGGAGCTCGTGAAGCTGAAGGCTGAAAAAATGCTCAGTGATGCCAGAGTTACCGAGTTGTCAACTGAGAAAGAGAATCTGCTAAAAATCCATGAAGATGAGAAGGCCAAGTTAAAAGGTCAGGTGGCTGAGCTGGAGGATCAGTTGGAATCGGAGGCCGCTTATCAATATGGTGAGGGCTTCCAGCAATGCTATGAACAAGTGAAGGTGGCGGCCCCCGAAGCCGATCTTTCCGATGTCAAGCCGACCAATGAGGTGGTGGATGGTCAGATTGTTCCTGTTAACAGGGAGCGAGATGATGCTGCGTCCCACTCCGATGGTCGAGAAGACGACCAGATGGAAGCTGATCCTCCTCATGCTGCTGCCTGA 3816 0.4631 MQIAEPIMKLYTEASESDGSSIGKEESAFVDSFVIPKLLPLTFKSISSSPASIDRKAQAKLLFVVEEDMDSNSKRKDKPFSWRYLFKPRRPSSDLNPSGPGGTTSSIQRSLPSSDLSPSGQGGTASGIRRSVPSSDLSTSGQGGTTSSILRSLPSFDLNPLDQQGTTSNPSGQGVTASSSSMDSHSHGIQRSPSSRRLHRYDVFISFRGPDTRNTFVDHLYNHLIRKGIVVFKDDIRLQKGESISPQLLQAIQDSRLSIVVFSKNYAESTWCLDELAAIAECRRDLKQIVFPVFYDVDPSHVRNQSMVGGISFFIVIDDRRWKRQRAIRDLAGLAGWHGTDNVEAIVLDQKENVLKCSAEGFSKMKSLKLLILYDENFSEIPNFLSNNLLYLLWHGYPFPFLPPKFEPYYLVELNLPHSSIQHLWKGCKHLPCLKRMDLSNSKCFKETPSFEEMLNLERLDLTGCTNLLQVHPSIGLLTKLAFLSLRNCSSLVSLDFCTTSNLSSLKVLQLSGCSKLQNTSLVGASNLEYLDMDRCTSLSTVHESMGALAKLRFLSLRDCTNLVSIPNNINTMTSMITLDLCGCFRLKNLPLTQNFNSCGLKSLIFMDVSFCNLLEVPDAIGELRCLERLNLQGNNFVSITSAINKLYRLAYLNLAHCHKLEFLPKLPLVNATAGGRELLFLGKDIMGLSEGSVEILDVVGGDDGGSPSAHGEESATVSDSMDSFEAAMEVPGASPPPESVNEEEIGNEEEVGNEEGSSDRPRSALVFHKKRRPKEMEPRPLSDWVDGSVLRIESKLQNRDEVERILKAHPDLVRAEVIVEPCTSEDRICLPKDDAVEADFIYFYEALLGRVRVGIPFSDFEVSILNTMNVAPTQLHPNSWASVRCFEAICGYFEDGKSLFPLYWTPNPKPIKGVDADLMNESDRIEMEFLLELDPLEASRIIPCIGKPKRFAGYMRGMAKRVSKADLVKRLEQGTARPTRSSAAPPAKKQKTTEPATSSGVTPITTLRPVGEVQAVVSPAQSQPALGPVIPPLTPQTVPDIILSEQNTVHWLPISEPSLFRSDFRADLLVDNHLRTPHDEQLFRQMGNKGLTRAVETNLARSMSMVRQMDMNYRAVEAACIQMRKEREILKKRTAELEGDAARVKSLEEELVKLKAEKMLSDARVTELSTEKENLLKIHEDEKAKLKGQVAELEDQLESEAAYQYGEGFQQCYEQVKVAAPEADLSDVKPTNEVVDGQIVPVNRERDDAASHSDGREDDQMEADPPHAAA* 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01129 1271 Coils Coil 1170 1204 - -
Rops7g01129 1271 Gene3D Ribonuclease Inhibitor 341 521 IPR032675 -
Rops7g01129 1271 Gene3D Ribonuclease Inhibitor 522 597 IPR032675 -
Rops7g01129 1271 Gene3D Ribonuclease Inhibitor 598 684 IPR032675 -
Rops7g01129 1271 MobiDBLite consensus disorder prediction 754 781 - -
Rops7g01129 1271 MobiDBLite consensus disorder prediction 976 1006 - -
Rops7g01129 1271 SUPERFAMILY L domain-like 356 669 - -
Rops7g01129 1271 MobiDBLite consensus disorder prediction 1241 1265 - -
Rops7g01129 1271 FunFam Disease resistance protein (TIR-NBS-LRR class) 197 358 - -
Rops7g01129 1271 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 345 519 IPR044974 GO:0006952
Rops7g01129 1271 SUPERFAMILY Toll/Interleukin receptor TIR domain 192 308 IPR035897 -
Rops7g01129 1271 SMART till_3 200 334 IPR000157 GO:0007165
Rops7g01129 1271 ProSiteProfiles TIR domain profile. 199 354 IPR000157 GO:0007165
Rops7g01129 1271 MobiDBLite consensus disorder prediction 700 781 - -
Rops7g01129 1271 Pfam TIR domain 201 306 IPR000157 GO:0007165
Rops7g01129 1271 MobiDBLite consensus disorder prediction 972 1006 - -
Rops7g01129 1271 MobiDBLite consensus disorder prediction 1225 1271 - -
Rops7g01129 1271 Pfam Putative gypsy type transposon 856 904 - -
Rops7g01129 1271 MobiDBLite consensus disorder prediction 96 191 - -
Rops7g01129 1271 Coils Coil 1131 1165 - -
Rops7g01129 1271 MobiDBLite consensus disorder prediction 87 194 - -
Rops7g01129 1271 Gene3D - 163 313 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01129 Rops-Chr7 15049162 15065621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01129 497 665 WRKY Transcription Factor Family AT4G12020 34.682 7.51e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01129 - - lja:Lj3g3v1556600.1 476.092