Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01128 ATGGACTCAAAGTCAAAACAGAAAGATAAGCCATTCTCATGGAGATACTTATTCAAACCTCGTCGGCCATCTTCTTATCTGAACCCATTGGACCAGCAAGGGACGACTTCCAACCCCTCAGGCCAGGGAGGTACAACTTCCAGTTCTTCCATGGATACTCATTCCCAAAGCAGCCCCTCATCGCGGCGGCTACATAGATACGATGTGTTTATTAGTTTCAGAGGTCCCGACACTCGCAACACTTTTGTTGATCATCTGTATAATCATCTCATCAGAAAAGGTATTTTCGTCTTCAAGGATGACATAAGGCTCCAGAAAGGAGAATCCATTTCTCCTCAGCTTCTACAAGCAATTCAAGATTCACGGCTTTCTATTGTTGTCTTCTCCAAAAATTATCCTGAGTCAACATGGTGTTTGGATGAATTGGCTGCTATTGCTGAATGCCGTAAAGATTTGAAACAAATTGTTTTCCCTGTTTTCTATGATGTTGATCCATCTCATGTACGAAACCTGAATGAGGAGTATCAGATTCTCTTCTATTCACTCAGGAAGAGATTCCGACATGATCGAGGCAGGGTTCTTAGATGGACGAGAGCTATGAGGGATTTGGCTGGATCAGCTGGTTGGGATGTCAGGAACAAAGCTGAAGGGTTGTCAAAAATGAAAAGTCTTAAATTGCTCATATTATATGATGAGAATTTGTCAGAAATACCTAATTTTCTTTCTAATAATCTACTGTATCTTTTGTGGCATGGTTATCCTTTTCCCTTTTTGCCACCGAAGTTTGAGCCGTGCTATCTTGTGGAATTGAATTTGCCTTATAGTAGCATCCAACAACTATGGAAAGGCTCCAAGCATCTCCCCTATCTGAAAAGGATGGATCTGAGCAACTCTAAGTGTCTTAAGGAGACCCCAAGTTTTGAATCGATCCCAAAACTTGAGCGTTTAGACCTTTCCGGATGCACAAACTTATTAGAGGTCGACCCATCAATTGGACTTCTAACAGAACTTGCATTCTTGAATTTGAGAGACTGTAGCAGTTTGGTGAGCCTCGATTTTGGCAATGAATCTAATTTAAGTTCTCTGAAAGTGCTACAACTCTCTGGTTGCTCAAAACTTCAAAATACCTTTCTGTTTGGGGCCTCAAATCTTGAGTACCTTGATATGGATCGATGTACAAGTTTATCCACGGTTCATGAATCTATTGGGACTCTTACAAAGTTGAGATTCTTGAGTTTAAGGGACTGCACAAATCTTGTCAGCATACCCAGCAGCATCAATGCCATGACATCTGTTATAAATCTAAATTTAAGTGGTTGCTCTAAACTTGAGAATCTGAACTTGACACAAACTTTCAATTCTTATGGCTTGAAATCTTTGATTTCTATGGACGTAAACTTTAGCAGTCTGCTTAAAGTACCTGATGCAATTGGAGAGTTGAGTTGTTTAGAAAGACTAAATCTACACGGAAACAACTTTGTTAATGTACCTTCTACCATCATGAAGCTTAAACGTCTTGCATATTTAAACTTGGCTCGTTGCCTTAAGCTTGAATCTTTGCCTGAGCTCCCATGGGTAAATGCTACATCAGGTGGATGGTATTTTAAAACGGAATCCGGATCTCGTGATCATAGGTCAGGATTATATATTTTTGACTGTCCCAAAGTGGATTATCCAACGGCCTTATTACGGAAAGCGCTTCGATGGTTACAAAGTCTACTTAAGCAACCCCATCACTTTCGGTGTGGCTTTGACATTGTTGTTCCCTGTGATTGGGAAAATATTGATTCTCTACGGGAATCAATTATTCCACAGTGGTTCGAGCATCGATTTGATGGGGGTTCAATAATGAGGATAATGCACTTTAATTTGGATGACAACTGGATGGGCTTTGCCTTTTGTGTAGCATTTGAGGTAAACAATGGTCTTGCAATTACTGGTTCTACTCATCATCCATCTTCCTCGTCACTACCACTGCCACATCCTTTTTATCTTTCTTTTGAAAGTGAACACACCGAGGAATGCTTTGATATGCCACTTAGTTTAGAACTTGATAAAATTGATGGCTCAAAGCATCTTTGGATAATCTATATATCTCGACAGCACTGTCATTTCGTGAAAACAGGAGCACGCATCACCTTTAAAGCCCGCCCAGGTTTGATGATAAAGCAATGGGGGTTGCACCCGGTAACCAAGCAAGACAGAGGGGCATCAATTATGGGATATTTTAAAGAACATTCTTTCCCATTCTGTGTCGTTGATATTGTAAAAGAAAGCAGTCATATCTTTGAGCCTAAAATCCAACTTCCTTACAATTGGTTTGTTTCCGACGAAGATGAAGTCGAGAATAATGAAGCCAAAAGGAAGGAATTTAGTCTGTCTAATTTGGGCCTTGAGATGGGCCAACCACAGTGA 2415 0.4046 MDSKSKQKDKPFSWRYLFKPRRPSSYLNPLDQQGTTSNPSGQGGTTSSSSMDTHSQSSPSSRRLHRYDVFISFRGPDTRNTFVDHLYNHLIRKGIFVFKDDIRLQKGESISPQLLQAIQDSRLSIVVFSKNYPESTWCLDELAAIAECRKDLKQIVFPVFYDVDPSHVRNLNEEYQILFYSLRKRFRHDRGRVLRWTRAMRDLAGSAGWDVRNKAEGLSKMKSLKLLILYDENLSEIPNFLSNNLLYLLWHGYPFPFLPPKFEPCYLVELNLPYSSIQQLWKGSKHLPYLKRMDLSNSKCLKETPSFESIPKLERLDLSGCTNLLEVDPSIGLLTELAFLNLRDCSSLVSLDFGNESNLSSLKVLQLSGCSKLQNTFLFGASNLEYLDMDRCTSLSTVHESIGTLTKLRFLSLRDCTNLVSIPSSINAMTSVINLNLSGCSKLENLNLTQTFNSYGLKSLISMDVNFSSLLKVPDAIGELSCLERLNLHGNNFVNVPSTIMKLKRLAYLNLARCLKLESLPELPWVNATSGGWYFKTESGSRDHRSGLYIFDCPKVDYPTALLRKALRWLQSLLKQPHHFRCGFDIVVPCDWENIDSLRESIIPQWFEHRFDGGSIMRIMHFNLDDNWMGFAFCVAFEVNNGLAITGSTHHPSSSSLPLPHPFYLSFESEHTEECFDMPLSLELDKIDGSKHLWIIYISRQHCHFVKTGARITFKARPGLMIKQWGLHPVTKQDRGASIMGYFKEHSFPFCVVDIVKESSHIFEPKIQLPYNWFVSDEDEVENNEAKRKEFSLSNLGLEMGQPQ* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01128 804 Gene3D - 64 224 IPR035897 -
Rops7g01128 804 Pfam Leucine Rich Repeat 266 285 IPR011713 -
Rops7g01128 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 219 375 IPR044974 GO:0006952
Rops7g01128 804 FunFam Disease resistance protein (TIR-NBS-LRR class) 63 225 - -
Rops7g01128 804 Gene3D Ribonuclease Inhibitor 225 376 IPR032675 -
Rops7g01128 804 MobiDBLite consensus disorder prediction 1 61 - -
Rops7g01128 804 Pfam C-JID domain 600 734 IPR045344 -
Rops7g01128 804 Pfam TIR domain 67 219 IPR000157 GO:0007165
Rops7g01128 804 SUPERFAMILY Toll/Interleukin receptor TIR domain 57 209 IPR035897 -
Rops7g01128 804 MobiDBLite consensus disorder prediction 1 16 - -
Rops7g01128 804 SMART till_3 66 206 IPR000157 GO:0007165
Rops7g01128 804 SUPERFAMILY L domain-like 214 526 - -
Rops7g01128 804 Gene3D Ribonuclease Inhibitor 377 452 IPR032675 -
Rops7g01128 804 Gene3D Ribonuclease Inhibitor 453 531 IPR032675 -
Rops7g01128 804 MobiDBLite consensus disorder prediction 26 61 - -
Rops7g01128 804 ProSiteProfiles TIR domain profile. 65 218 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01128 Rops-Chr7 15038406 15043838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01128 357 522 WRKY Transcription Factor Family AT4G12020 38.095 1.36e-15 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01128 - - var:108332841 605.134