Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01127 ATGAGCAACCTGTCATGCAACAAGGAATATCTTCCAATTGTTGGGCTCACTGAGTTTAATAAACTGAGTGCTAAGCTTATTTTTGGTGTTGACAGGCTTGCTATTCAAGAGACACTGTACATTGATTTTCTAGTACTGGTACCACCAGATGATGAGTTTCCTATCTTGAATTATCGTATGACTCAACTATTTAAGCCACCATTTCATGTTAATGCAATGATTGAAGAAAAAAGATCCCTCAAGGATGTTATACGTGAGGCTCGTGGTGAGAGTCTTCGGTTTATTAAACTTTGTGGTGGATATGGTGATCCAGAAATTCTTTTGTCTGGAGCACCAGGATCTCCCTTTGGTTCAGGTTGCATAAATTGGTCTTTCAAGGAGTTACTTGGTTACCGTGATTCGAAACGAAAGGGCCAGGAAGGTGCAACTCCCAGTGTCCAGGGAAATGTGCCATCTTCCGATCTGAACCCGTTGGACCAGCAAGGGACCACTTCCAACCCATCGGGCCAGGGAGGTACAGCTTCCAGTTCTTCCGTGGATTCTCATTCCCAAAGCAGCCCCTCATCTCTGCGGATCTGTAGATACGATGTGTTTCTCAGTTTCAGAGGTCCGGACACTCGCATCAATTTTGTTGATCATCTTTACAATCATCTCATCAGAAAAGGTATTTTTGCCTTCAAGGATGACCAATGTCTCCAGCAAGGAGAATCCATTTCACCAGAGCTTTTACGAGCAATCAAAGATTCACGGATTTCTATCGTTGTCTTCTCCAAAACATATGCCGAGTCAACATGGTGTTTGGATGAAATGGCTACTATTGCTGAATGCCATAAAGAATTGAAACAAACTGTTTTCCCTGTTTTCTATGATGTCGATCCATCTGATGTACGAAAACAGAATGGGGCGTACGAGAATGCCTTTGCTTTACATACCGAGAATGCCTTTGCTTTAAATACCGAGAATTTCCAAATTGATACAGGCAAGGTTGATCGATGGAAGACAGCTATGACGGGTTTGGCAGGGTTAGTTGGTCGGGATGGAACAGATAATGTCGAAGCTATAGTTCTAGATCAAAAAGAGAATGTCTTGAAATGCAGTGCTGAAGGGATGTCAAAAATGAAAAGTCTTAAATTGCTCATATTATATGATAGGAATTTTTCACAAATGCCCAAATTTCTTTCTAATAATCTACGATATCTTTCGTGGCATGGTTATCCATTCCTCTTTTTGCCACCGAAGTTTGAGCCGTGCTGTCTTGTGGAATTGAACTTGCCTCACTGTAGGATCCAACATCTATGGAAAGGCTGCAAGCGTCTTCCCTGCCTGAAAAGGATGGATCTGAGCAACTCCAAGTGTCTTAAGGAGACTCCAAGTTTTAAAGAGATGCAAAACCTTGAGCGTTTAGACCTTTCCGGATGCACAAACTTATTACAGGTCCATCCATCAATTGGACTTCTTACAAAACTTGCTTTCTTGAATTTGAGAGACTGTAGCAGTCTGGTGAGCCTCGATTTTGGCATTGCATTTAATTTTTCTTTGAAAGTGCTACAACTCTCTGGTTGCTCAAAACTTGAAAATACCATTCTGTTTGGCCCCTCAAATCTTGAGTACCTTGATATGGATCAATGTACAAGTTTATCCACGGTTCATGAATCTATTGGGACTCTTGCAATGTTGAGATTCTTGAGTTTAAGGGACTGCACAAATCTTGTCAGCATACCTGACAGCATCAATGCCATGACATCTATTAAAAATCTAGATTTACGTGGTTGCTCTAAACTTGAGAATCTGCCTTTAACACAAACTTTCGATTCTTATGGCCCGAAATATTTGATTTCTATGGACGTAAGCTTTTGCAGTCTGCTTAAAGTACCTGATGCAATTGGAGAGTTGAGTTGTTTAGAAAGACTAAATCTACAGGGAAACAACTTTGTTTTTGTACCTGATAGGATCAAGAGGCTTGATCGTCTTGCATATTTAAACTTGGCTCATTGCCATAATCTTGAATCTTTGCCTGAGCTCCCATCATTAAATGCTACATCAGGGGGAAGGTATTTTAAAACGGAATCCGGATCTCGTGATCATCGGTCAGGATTATATATTTTTGACTGTCCCAAGGTGGATTATCCATCGGCCTTATTTCACAAAGCGCTTCAATGGTTACAAAGTCTACTTAAGCAACCCCATCACTTTCGGTGTGGCTTTGACATTGTTGTTCCCTATGATTGGGATTGGGAAAATAATGCTTATCTATGGAACTCAGTTATTCCACGGTTGTTCGATCATCGATTTGATGGGGGTTCAATAAAGAGGATAGAGCACTTTGATGTGGATGACAACTGGATGGGCTTTGCCTTTTGTGTAGCATTTGAGGTAAACAATGGTCTTGCAATTGCGAGTCCTCCTCATCATTCATTTTCCTCGTCATTGCCACATCCTTTTTATCTTTCTTTTGAAAGTGAACACACGGAGGAACGCTTTGATTTTCCACTTGGTTTGGAACTGGACAACATTTATGACTCAAAACATCTTTGGATAGTCTATATATCTCGGGAACACTGTCATTTCGTGAACACAGGAGCACACATCACATTTAAAGCCCACCCAGGTTTGTTAATGAAGCAATGGGGGTTGCGCATGGTAACCACGCAAGACAGAGAGGCATCAATAGTGGGATATTTTGAAGAACATTCTTTACCATTCTGTGACGTTGTCGGTGATAATGTAAAAGAAAGCAGTCATAGCTTTGAGCCTAAAATCCAACTTCCTTACAATTGGTTTGTTTCTGATGAAGATGAAGTCGAGAATAATGAAGCCAAAAGGAAGGAAACTAGTCTCTCTAATTTGGGCCTTGAGATGGGCCAACCACAGTGA 2874 0.4102 MSNLSCNKEYLPIVGLTEFNKLSAKLIFGVDRLAIQETLYIDFLVLVPPDDEFPILNYRMTQLFKPPFHVNAMIEEKRSLKDVIREARGESLRFIKLCGGYGDPEILLSGAPGSPFGSGCINWSFKELLGYRDSKRKGQEGATPSVQGNVPSSDLNPLDQQGTTSNPSGQGGTASSSSVDSHSQSSPSSLRICRYDVFLSFRGPDTRINFVDHLYNHLIRKGIFAFKDDQCLQQGESISPELLRAIKDSRISIVVFSKTYAESTWCLDEMATIAECHKELKQTVFPVFYDVDPSDVRKQNGAYENAFALHTENAFALNTENFQIDTGKVDRWKTAMTGLAGLVGRDGTDNVEAIVLDQKENVLKCSAEGMSKMKSLKLLILYDRNFSQMPKFLSNNLRYLSWHGYPFLFLPPKFEPCCLVELNLPHCRIQHLWKGCKRLPCLKRMDLSNSKCLKETPSFKEMQNLERLDLSGCTNLLQVHPSIGLLTKLAFLNLRDCSSLVSLDFGIAFNFSLKVLQLSGCSKLENTILFGPSNLEYLDMDQCTSLSTVHESIGTLAMLRFLSLRDCTNLVSIPDSINAMTSIKNLDLRGCSKLENLPLTQTFDSYGPKYLISMDVSFCSLLKVPDAIGELSCLERLNLQGNNFVFVPDRIKRLDRLAYLNLAHCHNLESLPELPSLNATSGGRYFKTESGSRDHRSGLYIFDCPKVDYPSALFHKALQWLQSLLKQPHHFRCGFDIVVPYDWDWENNAYLWNSVIPRLFDHRFDGGSIKRIEHFDVDDNWMGFAFCVAFEVNNGLAIASPPHHSFSSSLPHPFYLSFESEHTEERFDFPLGLELDNIYDSKHLWIVYISREHCHFVNTGAHITFKAHPGLLMKQWGLRMVTTQDREASIVGYFEEHSLPFCDVVGDNVKESSHSFEPKIQLPYNWFVSDEDEVENNEAKRKETSLSNLGLEMGQPQ* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01127 957 Pfam C-JID domain 753 887 IPR045344 -
Rops7g01127 957 Gene3D - 159 336 IPR035897 -
Rops7g01127 957 FunFam Disease resistance protein (TIR-NBS-LRR class) 191 366 - -
Rops7g01127 957 MobiDBLite consensus disorder prediction 140 187 - -
Rops7g01127 957 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 354 502 IPR044974 GO:0006952
Rops7g01127 957 SUPERFAMILY L domain-like 365 677 - -
Rops7g01127 957 Pfam TIR domain 195 314 IPR000157 GO:0007165
Rops7g01127 957 Gene3D Ribonuclease Inhibitor 608 724 IPR032675 -
Rops7g01127 957 Gene3D Ribonuclease Inhibitor 349 528 IPR032675 -
Rops7g01127 957 Gene3D Ribonuclease Inhibitor 529 605 IPR032675 -
Rops7g01127 957 SMART till_3 194 342 IPR000157 GO:0007165
Rops7g01127 957 MobiDBLite consensus disorder prediction 136 187 - -
Rops7g01127 957 ProSiteProfiles TIR domain profile. 193 362 IPR000157 GO:0007165
Rops7g01127 957 Coils Coil 70 90 - -
Rops7g01127 957 MobiDBLite consensus disorder prediction 937 957 - -
Rops7g01127 957 SUPERFAMILY Toll/Interleukin receptor TIR domain 186 343 IPR035897 -
Rops7g01127 957 SUPERFAMILY Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 43 77 IPR036168 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01127 Rops-Chr7 15013906 15033457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01127 347 637 WRKY Transcription Factor Family AT4G12020 36.482 2.74e-32 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01127 - - var:108332841 619.387