Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01121 ATGTCGCAACTTGTCGTTTTTATCCCAACAGGTTTGACGGTGGTGAGGTTGGATGATGAGTGGGCCTTGACGGTGGTGAGGCGAGGGGTGGGGCGGTGGCGAAGTGGGAAGAGAGGGAGATTGGGTTTGGGGGAAGATGGTGTGGTTGTGGAGAACTCCATTGATTTCTCCATTCCTCTTGTCTACCGATCAGTGCCTCTACTTTCTCGCGAATCGCGTGAATATCAGGTGAGTTTTGGATCATCTTCTATGAGTTCCTCGTTGGTGATTTCACCTTTGCAAACAATGGATGCAAAGCAGATAGAGATAGCTAAAGTTGCAAAACATTGCTTCCAGAAGTTCGTAGAGAGAGAAACAGAAGAAAAAGATGAAGTTTCGTGGAGAAATCGAAAGAGGGGTTACTGGGTTAGGGGTCGTGAAAATCGGAAAAAGGAAGGGAAGTGGTTCTGTTCGGTACATGTGTATGTCTTCCTTGAACGCTTCTCTTCAAGCAATTCATCGTCTCTGAACAGTGAGAAAGAAGAACCGTTCGTTGAGTGGCTATATGTTACTCTCTTGGAGAAACTTGCTCCTGTGACCGTTTTGGGCCCTGCTGCTGGTTCGTCGGTTGAGCCTCTTGGGACAGGGAGGTATTTCACCTTCAAAGATGACAAAAGGCTCCAGAAAGGAGAATCCCTTTCACCGCAGCTTCTACAGGCAATTAAAAGTTCACCGGTTTCTGTTGTTGTCTTCTCAAAAACATATGCTGAGTCAACATGGTGTTTGGATGAAATGGCTACCATTGTTGAATGCTGTAAAGAGTTGAAACAAATTGTTTTCCCAATTTTCTATGATGTGGATCCATCTCCTGTACGAAACCAGAATGGGGTGTACGAGAATGCCTTTGTTTTACACACTGAGAAATTCAAACATGATCCAGGCAAGGTTGATCGATGGAAGAGAGCTATGAGGGGTTTGGCTGGATCAGTTGGTTGGGATGTTAGGAACAAGCCAGAGTTTCAAGAGATTGAAAATATTGTTCAAGCAGTGATAAAATCCTTAGGTCATAAATTTTCAGGGTTTGCTGATGACCTTATTGGGATACAATCTCGTGTAGAAGCATTACAAAGCCTTTTAAAATTAAGCTCAGAGGATGATGAATTTCGAGTTATAGGAATTTGGGGGATGGGTGGAATAGGAAAGACAACTCTTGTTACTGTCTTGTATGATAGAATCTCTTATCAGTTTGATGCTTCCTGTTTTATAAAGAACACTAGATATGCACCCACCCGTCCTATGGACGGGATGAATAACAAATTTCGCACTAAAGAATAA 1314 0.433 MSQLVVFIPTGLTVVRLDDEWALTVVRRGVGRWRSGKRGRLGLGEDGVVVENSIDFSIPLVYRSVPLLSRESREYQVSFGSSSMSSSLVISPLQTMDAKQIEIAKVAKHCFQKFVERETEEKDEVSWRNRKRGYWVRGRENRKKEGKWFCSVHVYVFLERFSSSNSSSLNSEKEEPFVEWLYVTLLEKLAPVTVLGPAAGSSVEPLGTGRYFTFKDDKRLQKGESLSPQLLQAIKSSPVSVVVFSKTYAESTWCLDEMATIVECCKELKQIVFPIFYDVDPSPVRNQNGVYENAFVLHTEKFKHDPGKVDRWKRAMRGLAGSVGWDVRNKPEFQEIENIVQAVIKSLGHKFSGFADDLIGIQSRVEALQSLLKLSSEDDEFRVIGIWGMGGIGKTTLVTVLYDRISYQFDASCFIKNTRYAPTRPMDGMNNKFRTKE* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01121 437 SUPERFAMILY Toll/Interleukin receptor TIR domain 210 325 IPR035897 -
Rops7g01121 437 ProSiteProfiles TIR domain profile. 180 347 IPR000157 GO:0007165
Rops7g01121 437 SMART till_3 199 322 IPR000157 GO:0007165
Rops7g01121 437 Pfam TIR domain 210 348 IPR000157 GO:0007165
Rops7g01121 437 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 213 420 IPR044974 GO:0006952
Rops7g01121 437 Gene3D - 354 433 IPR027417 -
Rops7g01121 437 Gene3D - 168 353 IPR035897 -
Rops7g01121 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 417 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01121 Rops-Chr7 14923065 14925366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01121 231 417 WRKY Transcription Factor Family AT4G12020 29.947 7.74e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01121 - - psat:127091204 322.783