Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01120 ATGAAAGAAGATATGGACTCAAACTCAGAACATTCAGATAGGTTACTCTGTTGCTTGGTTCCGTTTTGGCTCCTGCTGAGTCGTTGGCTACGACCTCGTCGGCCATCTGCTGATCTGAGCCCAATGAGTCAGGAAGGTACAACTCCTAGTCTCCAAGAAAGTCAGTTGTCTTCCGATCCGAACCCGTTGGGCCTGCGAGGGAAAATTTCCAACCCGTTGGGCCTGCGAGGGATAATTTCCAACCCGTCAGGCGAGGAAGTCACAACTCTTCTCCAAAGAAGTCATCTAAACCCATTGGGCCAGCTATCGGGCCAGGGAGGTACAACTTCAAGGTTGGATTCTAATTCCGATAGCATACGAAGCAGCCCCTCCTCTCCGCGGACCCATAAATATGTTGTGTTTATCAGTTTCAGAGGTCCTGACACTCGCAACACTTTTGTTGATCATCTCTACAATCATCTCACCAAGAAAGGTATTTCCACCTTCAAAGATGATGAACGTCTCCAGGAAGGAGAATCCATTTCTCCTCAGCTTCTACAGGCAATTAAAGATTCACGGGTTTCTATTGTTGTCTTCTCAAAAACATATGCTGAGTCAACATGGTGTTTGGATGAAATGACTGCTATTGTTGAATGCCGTCGAGAATTGAAACAAATTGTTTTCCCTGTTTTCTATGATGTCGATCCATCTCATGTACGAAAACAAAATGGGGCGTACGAGAATGTTTTTGCTTCACTCAAGGAGAGATTCAAACATGATCCAGCCAAGGTTGACAGATGGAAGAGAGCTATGACGAGTTTGGCAGAATTAGGTGGTTGGGATGGAGAAGATAATGTTGAAGCTATAGTTCTTGATGAAAAAGAGAATGTCTCCGAATGTAAGGTTGAAGGATTGTCAAAAATGAGAAATCTCAGATTGCTCATATTGTATGAAAAAAACTTTTCAGGAAGACTTGATTTTCTTTCTAATAATCTACGGTATCTTTTGTGGCATGGTTATCCTTTTTCCTCTTTGCCATTGGGGTTTGCGCCGTATTTTCTTGTGGAATTGAATATGCCTCGCAGTAGCATCCAACACTTATGGAAAGACTTCAAGCATCTCCCCTATCTGAAAAGGATGGATCTGAGCAACTCCAAGTGTCTTGAGGAGACTCCAAGTTTTGAATGGATCCTAGACCTTGAGCATTTAGACCTTTCCGGATGCACAAACTTGTTACAGGTCCACCCATCAATTGGACTTCTAACAAAACTTGCTTTCTTGAATTTGAGAGACTGTAGCAGTTTGGTTAGACTTGATTTTGACAATGCATCTAATTTAAGTTCTCTCAAAGTTCTACACCTCTCTGGTTGTACAAAACTTGGATATACCTCACTGATAGGGGCCTCAAATCTTAAGTACCTTGATATGGATCGGTGTAAAAGTTTATCCACAATTCATGAATCTATTGGGGCTCTTGCAAAGCTTAGATTATTGAGTTTAAGAGACTGCACAAATCTTGTCTGCTTACCGAACAACTTCAATACCATGATATCCGTAATTAATCTAGATTTATGTGGTTGTGTTAAACTTAAGAATCTGCCCTTGTCACAGACTGTTGATTCTTGTTGTCTGAAATCTTTGATTTTTATGGATGTAAGCTTTTGCAATCTACTTGAAGTGCCTGATGCAATGGGAGAGTTGTGGTGTTTAGAGAGATTAAATCTACAGGGAAACAACTTTGTTTCGGTAACTTCTGCCATTGAGAGGCTTGATCGTCTAGCATATTTAAACTTGTCACATTGCCATAAGCTTGAATCTTTACCAAAGCTGTCATCAGTAAAGGCCAAATCAGGGGGCAGGTATTTTAAAACGGTACCTGGATCTCGTGATCATAGGTCAGGATTATACATTTTTGACTGTCCCGAGGTGGCTTTTAAGTTGTCCATAGATGCTCTATATAGCTACCGTGATGAATTTCCATGGCAATTCGAATGGCTACGAAGACTAGTTGAGGCACCCCATTACTTCCGGTGTGGCTTTGACATTGTGGTTCCCTGGGATTGGGAGTATATTGATTCCCCTCAATATCCAATTATTCCAACATGGTTCGATCATCGATTTGACAGGGGTTCAATAATAAAGATAATGCACTCTGATGTGAATGCAAGATGGACTGGCTTTGCCTTCTGTGTAGCATTTGAGGTAAACAATCGTCTTGCAATTGCTGGTTCTCCACATCATTCATTTTCCTCGCCATTGCGACATCCTTTTTATCTTTCATTTGAAAGTGAATACACGGAAGAGTGCTTTGATATGCCACTTAGTTTGAAACTAGATGAGATTGATGGCTCAAAACATCTTTGGATAATCTATATATCTCGACAACACTGCCATTTTGTGAACACGGGTGCGCGCATCACATTTAAAGCCTGCCCAGGTTTGAAGATTAAGCAATGGGGGTTGCGCAAGGTATATGTAGAGGCACTGAATATGGGAACTATATTAAGACATCGTCTCTCCTCCAATTTACGTGGAGATGATGATCTTGCCATTGATAATGTAAAAGAAAGCAGCAATAGCTTTGGTCCTAAAATCCAGCTTCCTTACAATTGGTTTTTTTCTAACGAAGATAAAGTTGAGAATGATGAAGCCAAAAAGAAACTCTCTCCAGCTCCGGTTTCTTTGTGGAGAATCCAATATTTAATATTGGCAATTCCTTGGAGAGTTACCGTTGAGGAAGAGAATGAGTGTTCAGATAATCAAAGACCAGAGAACAAAAAGTACGTGGTTCGTGATTCAAATCTGCCAGTGATCTTGTCGAAATCTCGTGATGACAGAGGAGGTGAAGATGTGCGTCGTCCTGGCTGTCGAGTGGAGCAGGCTGCGAAGCACCAGCCTGGTAATGATCTGGCTGTGTCTGTGAAGTCTGTGAAGTACTGGGCTGTGTCTGGTGATATCCATGTGGATAAGGCCAACAATAAGGATAACCCTGGGGATATCCATGCAGATAACTCTGAGGATATCCCTGTGGATAACCCTGAGGATAACCCTGGGTCGATGGCGGAAAATGAGGTGGTACAAAAGGAGGTGGTACAAAAGGAGGCGGGAAAAAGGGAGGCTGAGGCTGTGGCTGAGGCTGAGGCTGTGGCTGAGGCGGCGATGAATCATCTCGCTGACGACGTCGACCTCGTCCACGCCCTCTAG 3183 0.427 MKEDMDSNSEHSDRLLCCLVPFWLLLSRWLRPRRPSADLSPMSQEGTTPSLQESQLSSDPNPLGLRGKISNPLGLRGIISNPSGEEVTTLLQRSHLNPLGQLSGQGGTTSRLDSNSDSIRSSPSSPRTHKYVVFISFRGPDTRNTFVDHLYNHLTKKGISTFKDDERLQEGESISPQLLQAIKDSRVSIVVFSKTYAESTWCLDEMTAIVECRRELKQIVFPVFYDVDPSHVRKQNGAYENVFASLKERFKHDPAKVDRWKRAMTSLAELGGWDGEDNVEAIVLDEKENVSECKVEGLSKMRNLRLLILYEKNFSGRLDFLSNNLRYLLWHGYPFSSLPLGFAPYFLVELNMPRSSIQHLWKDFKHLPYLKRMDLSNSKCLEETPSFEWILDLEHLDLSGCTNLLQVHPSIGLLTKLAFLNLRDCSSLVRLDFDNASNLSSLKVLHLSGCTKLGYTSLIGASNLKYLDMDRCKSLSTIHESIGALAKLRLLSLRDCTNLVCLPNNFNTMISVINLDLCGCVKLKNLPLSQTVDSCCLKSLIFMDVSFCNLLEVPDAMGELWCLERLNLQGNNFVSVTSAIERLDRLAYLNLSHCHKLESLPKLSSVKAKSGGRYFKTVPGSRDHRSGLYIFDCPEVAFKLSIDALYSYRDEFPWQFEWLRRLVEAPHYFRCGFDIVVPWDWEYIDSPQYPIIPTWFDHRFDRGSIIKIMHSDVNARWTGFAFCVAFEVNNRLAIAGSPHHSFSSPLRHPFYLSFESEYTEECFDMPLSLKLDEIDGSKHLWIIYISRQHCHFVNTGARITFKACPGLKIKQWGLRKVYVEALNMGTILRHRLSSNLRGDDDLAIDNVKESSNSFGPKIQLPYNWFFSNEDKVENDEAKKKLSPAPVSLWRIQYLILAIPWRVTVEEENECSDNQRPENKKYVVRDSNLPVILSKSRDDRGGEDVRRPGCRVEQAAKHQPGNDLAVSVKSVKYWAVSGDIHVDKANNKDNPGDIHADNSEDIPVDNPEDNPGSMAENEVVQKEVVQKEAGKREAEAVAEAEAVAEAAMNHLADDVDLVHAL* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01120 1060 SMART till_3 130 270 IPR000157 GO:0007165
Rops7g01120 1060 MobiDBLite consensus disorder prediction 35 67 - -
Rops7g01120 1060 ProSiteProfiles TIR domain profile. 129 290 IPR000157 GO:0007165
Rops7g01120 1060 Pfam C-JID domain 692 820 IPR045344 -
Rops7g01120 1060 SUPERFAMILY Toll/Interleukin receptor TIR domain 121 273 IPR035897 -
Rops7g01120 1060 MobiDBLite consensus disorder prediction 983 1001 - -
Rops7g01120 1060 MobiDBLite consensus disorder prediction 97 126 - -
Rops7g01120 1060 MobiDBLite consensus disorder prediction 983 1014 - -
Rops7g01120 1060 MobiDBLite consensus disorder prediction 40 61 - -
Rops7g01120 1060 FunFam Disease resistance protein (TIR-NBS-LRR class) 127 296 - -
Rops7g01120 1060 SUPERFAMILY L domain-like 296 603 - -
Rops7g01120 1060 Gene3D - 128 287 IPR035897 -
Rops7g01120 1060 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 281 453 IPR044974 GO:0006952
Rops7g01120 1060 Gene3D Ribonuclease Inhibitor 533 628 IPR032675 -
Rops7g01120 1060 Gene3D Ribonuclease Inhibitor 458 532 IPR032675 -
Rops7g01120 1060 Gene3D Ribonuclease Inhibitor 288 457 IPR032675 -
Rops7g01120 1060 Pfam TIR domain 130 277 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01120 Rops-Chr7 14906586 14916481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01120 437 601 WRKY Transcription Factor Family AT4G12020 32.738 5.50e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01120 - - vra:106778604 632.484