Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01118 ATGCATATGACATGCACTCCACCTTGTAAATTTGAATTTTGCTGGCTATGCCTTGGTGCATGGTCAGACCATGGTGAAATGACTGGTGGCTTCTATGCTTGCAATCGATATGAAGCAGCTAAACAAGAGGGGGTGTATGATGAAACTGAAAGAAGAACAGAAATGGCAAAGAATTCATTAGAGAGGTACACACATTATTATGTACGGTGGGCCAGCAACCAATCTGTACGCACCACTCCATACATTTTCTGTTCATGTGTAGGACACTATGCTAATGCTTCAGGTGTTAATTTCACGGCAAGGCAAGATTATGGAACTTCTTTGCCAGGGAGGAGATTCAGGAACGAAAGCAAAAAGGTAGAAGCAGCTGGTTTAGTTGGTAAAACTCAAGTTCCGATTTTGAAGGAGATTAAGCAGAAGAAAGTGAAAAAAAGGTTCAATACAACAAAAATGTTGCAGTTGATAAGAGGGAAAAGGCATGTACCGAATTTTGCAAAGCTTGAAGCTCGCATGGTGGGAAAGGCTTCCTCAGCTGCTGCTCAACAGCCAGGTTGGTCCTCTGTTCCTTCAACTGGGAAGTTCAACGGAGCTGCTGAAGATTTGGCTGAACAATCCACTTCAACATCAGTATATTTTATAGTTTCAGAATGGTTGAGAAGTACTGGAAGTGTTGGCGGGGCTAGCTGTTTAGCATACTATTTTGCATCTCCGTCATAA 717 0.424 MHMTCTPPCKFEFCWLCLGAWSDHGEMTGGFYACNRYEAAKQEGVYDETERRTEMAKNSLERYTHYYVRWASNQSVRTTPYIFCSCVGHYANASGVNFTARQDYGTSLPGRRFRNESKKVEAAGLVGKTQVPILKEIKQKKVKKRFNTTKMLQLIRGKRHVPNFAKLEARMVGKASSAAAQQPGWSSVPSTGKFNGAAEDLAEQSTSTSVYFIVSEWLRSTGSVGGASCLAYYFASPS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01118 238 ProSiteProfiles TRIAD supradomain profile. 1 38 IPR044066 -
Rops7g01118 238 SUPERFAMILY RING/U-box 1 27 - -
Rops7g01118 238 Gene3D - 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01118 Rops-Chr7 14854766 14856664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01118 1 77 C3H Transcription Factor Family AT2G31510 88.312 3.39e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01118 K11968 - gmx:100793295 166.777