Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01116 ATGCTAATGGATGACCATGTGAATGAAAACACAAATTACTCACCAGCCCACTTTTTTGGGGTCTATGATGGACATGGGGGCAGCCAGGTTGCCAATTACTGCCGGGAACATCTTCATTCGGTGTTGATTGAGGAGATAGAAGCTCTAGAATCAAGTTTGGCTAAAAAGAATGGGAAAGACAATTGGAAGAACCAATGGAAGAAAGCATTATCCAATTGTTTCCATAAAGTAGATGCTGAGGTTGGAGGAGTTAGTGCAGGTAATGATGAAAGGAACAGTGATGATGTATCTGAGTCAAATATGGAAGAAGCTCTTGCTCCTGAAACTGTTGGCTCTACTGCACTGGTTGCCATTTTGACCCAAACCCACATAATAGTTGCAAATTGTGGTGATTCAAGAGTAGTCTTGTGTCCTGGGGTCTCTTCATTTCTAAGCTAA 438 0.4201 MLMDDHVNENTNYSPAHFFGVYDGHGGSQVANYCREHLHSVLIEEIEALESSLAKKNGKDNWKNQWKKALSNCFHKVDAEVGGVSAGNDERNSDDVSESNMEEALAPETVGSTALVAILTQTHIIVANCGDSRVVLCPGVSSFLS* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01116 145 PANTHER PROTEIN PHOSPHATASE 9 138 IPR015655 GO:0004722|GO:0006470
Rops7g01116 145 ProSiteProfiles PPM-type phosphatase domain profile. 1 145 IPR001932 -
Rops7g01116 145 SUPERFAMILY PP2C-like 3 137 IPR036457 -
Rops7g01116 145 ProSitePatterns PPM-type phosphatase domain signature. 18 26 IPR000222 GO:0043169
Rops7g01116 145 Pfam Protein phosphatase 2C 7 137 IPR001932 -
Rops7g01116 145 CDD PP2Cc 3 137 IPR001932 -
Rops7g01116 145 Gene3D - 2 143 IPR036457 -
Rops7g01116 145 MobiDBLite consensus disorder prediction 84 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01116 Rops-Chr7 14852314 14852844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01116 1 143 PP2C-type Phosphatase Gene Family AT1G17550 47.586 6.72e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01116 K14497 - gmx:100812974 195.282