Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01114 ATGAGCCTTCTGCATAAAATTGACGCTGAAAAGTTTTTGAATGACTTCGTAAATTTTGAACATTGTCATCAGCAAAGAAGCTGGCCATTGTTATTTGACTTTGAATATGAGCAAAGGCTCAGTTGCTTAAAAAGATCTTTCATGAATGGCTTAGATCGGAAAGCATGCTTTGTGATACTGATTGAAGGCTCAAGTCAAGATCTCATTCTGGACCATGGATTTGATACTAGGCTCTCATCTTCGTTAAAGTTGAACACTGGTGCCTCTCTCATCATCAAGCGATTCAGATTGGATTCTAGTGTTGATTACAACTCTCATCTCTTTTATTTACCAAATACCAAGTCAACTTCTTTCCTCCCTCAAAAAATCACAATCCGTCCTCTTCCAACAGTGAGGATAGTTCTCCGAATTTTCAAGTGTTTGGATGAAATGGCTACTATTGCTGAATGTCGTCAAGAATTGAAACAAAATGTTTTCCCAGTTTTCTATGATATCGATCCATCTCACGCACGAAACCAAAATGGGGTGTACCAGTTTGTCTTTTCTGCACACACTGAAAAATTCAAACATGATCCAGTAGCATCCGACAACTGTGGAACGGCTGCAAGGATGGATATGAGCAACTCCAAGTGTCTTAAGAAGACTCCAAGTTTTGAAGGGATCCCAAACCTTGAGCGTTTAGACCTTACAGGATGCACAAAGTTATTTAATGTCCATACATCAGTTGGACTTCTTACAAAACTTGCTTTCTTGAGTTTGAGAAATTGTAGCAGTCTGGTCGGTCTCAATTTTGGCAGTGAATCTAATTTAAGTTCTCTGAAAGTTTTACACCTCTCTGGTTGCACAAAACTTCAAAGTACCTCTCTGGTAGGGGCCCCAAATCTTGAGTATCTTGATATGGATCGATGTACTAGTTTATCCATGGTTCATGAATCTATTTGGGCTCTTGCTAAGCTTAGGTTCTTGAGTTTAAGGGACTGCACAAATCTTGTCAACATGCCGAACAACATCGATACCATGACATCTATTATAACTCTAGATTTACGCGGTTGCATTAAACTTAAGAAGCTGTCCTTGAAAAGAACTTTCAATGCTTATTCTATGGAATCTTTGATTTTTATGGATGTAAGCTTTTGCAATCTTCTTGAAGTACCTGACGCAATTGGAGAATTGAGGTGTTTAGAAAGACTAAATCTACAGGGGAACAACTTTGTTAAGGTAACTTCTACCATCAAGAGGCTTGATCGTCTAGCATATTTCAACTTGGCTCATTGCCATAAGCTTGAATCTTTCCCTGAGATCCCAACAGGAGTGGCTACATCAGGGGGAAGGTATTTTAAAACAGCATCCGGATCACATGATCATAGGTTAGGATTATATATTTTTGACTGTCCCAAGGTAGCTCATAAGTTGCCAGTAACTTACAATGAACGGCACGTCTATTGGGAATATGTATGGGATCGATGGCTACGAAGACTAGTTGAGCAACCCTGTCACTTTCGGTGTGGCTTTGACATTGTTGTTCCTTGGAATTGGAAAAATATTGATTCCCCACAGAATCCAATTATTCCAGTGTGGTTCGATTGTCGATTTGATGGGGGTTCAATAAAAAGGATATCAATGCAATCTGATGTGGATGACAATTGGGATGACTTTGTCTTTTGTGTAGCATTTGAGGCAAAAAATCGTCTTGCACTTGCTGATTCTCCACATCAATCATTTTCCTCGCCACTGCCACTGCCGCATCCTTTTTATCTTTCTTTTGAAAGTGAACACACGGAAGAACGCTTCGATATGACAGTTAATTTGGAACCGGACAAGATTGATGGCTCAAAACATCTTTGGGTAATCTATATATCTCGACAGCACTGTCATTTCGTGAAAACAGGAGCGTGCATCACATTTAAAGCCTGCCCAGGTTTGATGATGAAGCAATGGGGGTTGCGCATGTTAAATGAAGAGGTATATATAATGGGACATAGAAAACAACGTCATCGCCCATTGTTCTATGTAGATAATGTGACATTGATAACGTAG 2037 0.3957 MSLLHKIDAEKFLNDFVNFEHCHQQRSWPLLFDFEYEQRLSCLKRSFMNGLDRKACFVILIEGSSQDLILDHGFDTRLSSSLKLNTGASLIIKRFRLDSSVDYNSHLFYLPNTKSTSFLPQKITIRPLPTVRIVLRIFKCLDEMATIAECRQELKQNVFPVFYDIDPSHARNQNGVYQFVFSAHTEKFKHDPVASDNCGTAARMDMSNSKCLKKTPSFEGIPNLERLDLTGCTKLFNVHTSVGLLTKLAFLSLRNCSSLVGLNFGSESNLSSLKVLHLSGCTKLQSTSLVGAPNLEYLDMDRCTSLSMVHESIWALAKLRFLSLRDCTNLVNMPNNIDTMTSIITLDLRGCIKLKKLSLKRTFNAYSMESLIFMDVSFCNLLEVPDAIGELRCLERLNLQGNNFVKVTSTIKRLDRLAYFNLAHCHKLESFPEIPTGVATSGGRYFKTASGSHDHRLGLYIFDCPKVAHKLPVTYNERHVYWEYVWDRWLRRLVEQPCHFRCGFDIVVPWNWKNIDSPQNPIIPVWFDCRFDGGSIKRISMQSDVDDNWDDFVFCVAFEAKNRLALADSPHQSFSSPLPLPHPFYLSFESEHTEERFDMTVNLEPDKIDGSKHLWVIYISRQHCHFVKTGACITFKACPGLMMKQWGLRMLNEEVYIMGHRKQRHRPLFYVDNVTLIT* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01114 678 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 267 357 - -
Rops7g01114 678 Pfam TIR domain 139 193 IPR000157 GO:0007165
Rops7g01114 678 SUPERFAMILY Toll/Interleukin receptor TIR domain 140 185 IPR035897 -
Rops7g01114 678 SUPERFAMILY L domain-like 204 516 - -
Rops7g01114 678 Gene3D Ribonuclease Inhibitor 197 286 IPR032675 -
Rops7g01114 678 Gene3D - 139 196 IPR035897 -
Rops7g01114 678 Gene3D Ribonuclease Inhibitor 287 435 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01114 Rops-Chr7 14805558 14826582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01114 266 433 WRKY Transcription Factor Family AT4G12020 32.571 1.56e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01114 - - var:108332841 484.952