Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01109 ATGAAGCCGAGCATGGCCTGGCATGTGCAAACTATCCATGGCCTCACGAGGGCATCCTCGGCTCATATGATCATGCTTCGCTTCGCCGTGGTCATCAAGTTTATCAACAAGTCTCAGGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGGTTTGGTTGGTGTGGCTTATACAGAAGAGGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGTTGAGATGTTTACGCGTCCTGGTAAACTCAGTGATCGCTTTCCTCAGCCATATGCAAATGAATCACCGCTAGGTTTGCCAATGGAGGAGCCTATCCTCCGTATCTAA 345 0.4841 MKPSMAWHVQTIHGLTRASSAHMIMLRFAVVIKFINKSQASCHSMSLISYRGLVGVAYTEEEVKAMAAEIEVVDGPNDEVEMFTRPGKLSDRFPQPYANESPLGLPMEEPILRI* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01109 114 PANTHER CYTOCHROME C1 38 101 IPR002326 GO:0009055|GO:0020037
Rops7g01109 114 SUPERFAMILY Cytochrome c 40 101 IPR036909 GO:0009055|GO:0020037
Rops7g01109 114 Gene3D - 5 104 IPR036909 GO:0009055|GO:0020037
Rops7g01109 114 PRINTS Cytochrome C1 signature 77 97 IPR002326 GO:0009055|GO:0020037
Rops7g01109 114 PRINTS Cytochrome C1 signature 32 51 IPR002326 GO:0009055|GO:0020037
Rops7g01109 114 Pfam Cytochrome C1 family 39 101 IPR002326 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01109 Rops-Chr7 14776208 14776552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01109 40 101 Chloroplast and Mitochondria Gene Families AT3G27240 95.161 1.31e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01109 K00413 - egr:104422685 120.938