Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01107 ATGCCCAATTTTCTTTCTAATAATCTACGATATCTTTTGTGGCATGGTTATCCATTTCACTTTTTGCCACCGAAGTTTGGGCCGTACTATCTTGTGGAATTGAATTTGCCTCATAGTAGCATCCAACGACTATGGGAAGGCTGCAAGCGTCTCCCTTGCCTGAAAAGGATGGATCTGAGCAACTCCAAGTGTCTTACGGAGACTCCAAGTTTTAAAGAGATGCAAAACCTTGAGCGTTTAGACCTTTCCGGATGCACAAACTTATTACAGGTCCATCCATCAATTGGACTTCTAACAAAACTTGCTTTCTTGAATTTGAGAGACTGTAGCAGTTTGGTGAGCCTCGATTTTGGTAATGAATCTAATTTAAGTTCTCTGGAAGTGCTACAACTCTCTGGTTGCTCAAAACTTGAAAATACCTTTCTGTTTGGGGCCTCAAATCTTAAGTACCTTGATATGGATCGATGTACAAGTTTATCCACGGTTCATCATTATATTGGGACTCTTGCAAAGCTTAGATTCTTGAGTTTAAGGGACTGCACAAATCTTGTCAGTTTACCCAGGAGCATGCATGCCATGACATCTGTTATAAATCTAAATTTAAGTGGTTGCTCTAAACTTGAGTATCTGCCCTTGACACGAACTTCCAATTCTTATGGCCTGAAATCTTTGATTTCTATGGACGTAAGCTTTTGTAATCTGCTCAAAGTAGATGATGCAATTGGAGAGTTGAGTTGTTTAGAAAGACTAAATCTTCAGGGAAACAGCTTTGTTTATGTACCTTCTACCATTATGAAGCTTGAACGTCTAGCATATTTAAACTTGGCTCATTGCCATAAGCTTAAATATTTGCCTGAGCTCCCATGGGTAAAGGCTACATCAGGGGGAAGGTATTTTAAAACGGAATCCGGATCTCGAGATCATAGGTCAGGATTATATTTTTTTTACTGTCCCAAGGTGGAATTTCTAACGGTCTTATTAGACGATGCGCTTCTATGGTTACGAAGTCTACTTAAGCAACCCCATCACTTTCGGTGTGGCTTTGACATTGTTGTTCCCTGTGATCGGGAAAATACTGATTATCTACGGAATTCAATTATTCCAGAGTGGTTCGAGCATCGATTTGATGGGGGTTCAATAATGAGGATAATGCACTTTAATGTGGATGACAACTGGATGGGCTTTGTCTTTTGTGTAGCATTTGAGGTAAACAATGGTCTTGTAATTGCTGGTTCTGCTCATCATTCATTTTCCTCGTCATTGCCACATCCTTTTTATCTTTCTTTTGAAAGTGAACACACGGAGGAACGCTTTGATTTTCCACTTAGTTTGGAACTGGACAAGATTGATGGCTCAGAACATCTTTGGATAATCTATATATCTCGGCGACACTGTCATTTCGTGAACACAGGAGCACTCATCACATTTAAAGCCCGCCCAGGTTTGATTATGAAGCAATGGGGGTTGCACACGCTAACCAAGCAAGACGTAGCGACATCGGAAGATTTTGAAGAACATTCTTTCCCATTCTGTGTTGTTGATAATGTAAAAGAAAGCAGTCATATCTTTGAGCCTAAAATCCAACTTCCTTACAATTGGTTTGTTTCTGACGAAGATGAAGTCGAGAATATTGAAGCCAAAAGGAAGGAAATTAGTCTGTCTAATTTGGGCCTTGAGATGGGCCAACCACAGTGA 1695 0.4012 MPNFLSNNLRYLLWHGYPFHFLPPKFGPYYLVELNLPHSSIQRLWEGCKRLPCLKRMDLSNSKCLTETPSFKEMQNLERLDLSGCTNLLQVHPSIGLLTKLAFLNLRDCSSLVSLDFGNESNLSSLEVLQLSGCSKLENTFLFGASNLKYLDMDRCTSLSTVHHYIGTLAKLRFLSLRDCTNLVSLPRSMHAMTSVINLNLSGCSKLEYLPLTRTSNSYGLKSLISMDVSFCNLLKVDDAIGELSCLERLNLQGNSFVYVPSTIMKLERLAYLNLAHCHKLKYLPELPWVKATSGGRYFKTESGSRDHRSGLYFFYCPKVEFLTVLLDDALLWLRSLLKQPHHFRCGFDIVVPCDRENTDYLRNSIIPEWFEHRFDGGSIMRIMHFNVDDNWMGFVFCVAFEVNNGLVIAGSAHHSFSSSLPHPFYLSFESEHTEERFDFPLSLELDKIDGSEHLWIIYISRRHCHFVNTGALITFKARPGLIMKQWGLHTLTKQDVATSEDFEEHSFPFCVVDNVKESSHIFEPKIQLPYNWFVSDEDEVENIEAKRKEISLSNLGLEMGQPQ* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01107 564 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 121 211 - -
Rops7g01107 564 Pfam C-JID domain 365 497 IPR045344 -
Rops7g01107 564 SUPERFAMILY L domain-like 5 290 - -
Rops7g01107 564 Gene3D Ribonuclease Inhibitor 141 215 IPR032675 -
Rops7g01107 564 Gene3D Ribonuclease Inhibitor 1 140 IPR032675 -
Rops7g01107 564 Gene3D Ribonuclease Inhibitor 216 295 IPR032675 -
Rops7g01107 564 Pfam Leucine Rich Repeat 30 47 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01107 Rops-Chr7 14744847 14753276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01107 4 271 WRKY Transcription Factor Family AT4G12020 38.062 1.64e-32 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01107 - - var:108332841 597.045