Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01105 ATGTACCACCGTAGATTCAAGACCCAACCATTATATCTAGCTGACCCAGATGAGCCCGAGCCCATGCCCATCTCAGAAACCGGGCCTGCTTCTCCTTCTTCTGGTGAAGACACTAAAACTGAAGCACCATCACCCAAGAAAAGGAGAGAGATGAAGAAGAGGGTGGTGAGTATACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAGACATATCCACCGTCTGATTCATGGGCCTGGAGAAAGTACGGTCAGAAGCCCATCAAGGGCTCCCCTTATCCCAGGGGATACTACCGATGCAGCAGTTCAAAGGGGTGCCCCGCAAGGAAGCAAGTCGAGAGAAGCCGTGTGGACCCCACAAACCTCATCGTCACCTACGCCTACGAACACAACCACTCCCTCCCCCTCCCCAAATCCCATTCCTCCGCCGCCGTCGCTTCAGCCGCCACATTCCCGCCGGAGGACCCAACGGTTTTCGCGACGCATCCAGACCTAGAACTCGCCGGCGACTCCGCGGTTCTGCTCTGCCACCACCACCAATCCGAGTTCGGATGGTTCGATGACGTGGCCTCCACCGGCGGCGTCCTTGAAAGCCCGATCTGCGGCGAGGTGGAGGATTTGACGATTACGATGAGGGAGGAGGATGAATCGCTGTTCGCCGACCTCGGCGAGTTGCCGGAATGTTCGGTGGTTTTCCGGCGGAGGAATATTCCGAGTGCCAGCGCGATTCAGTGTGGCGGCATCACAGGATAA 756 0.5701 MYHRRFKTQPLYLADPDEPEPMPISETGPASPSSGEDTKTEAPSPKKRREMKKRVVSIPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTNLIVTYAYEHNHSLPLPKSHSSAAVASAATFPPEDPTVFATHPDLELAGDSAVLLCHHHQSEFGWFDDVASTGGVLESPICGEVEDLTITMREEDESLFADLGELPECSVVFRRRNIPSASAIQCGGITG* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01105 251 MobiDBLite consensus disorder prediction 1 74 - -
Rops7g01105 251 ProSiteProfiles WRKY domain profile. 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g01105 251 SUPERFAMILY WRKY DNA-binding domain 71 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops7g01105 251 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 24 230 IPR044810 GO:0003700
Rops7g01105 251 Pfam WRKY DNA -binding domain 77 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g01105 251 Gene3D WRKY domain 63 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops7g01105 251 SMART WRKY_cls 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops7g01105 251 FunFam WRKY transcription factor 65 62 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01105 Rops-Chr7 14729645 14732172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01105 3 238 WRKY Transcription Factor Family AT3G58710 48.846 6.89e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops7g01105 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01105 - - cam:101504205 426.787