Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01095 ATGGCCTCCATGCCGTTGGGGCCGCACCACCACCACCAACCACCGCAACCAGCTGCTCTGCCGTTACCTCCACCGTCGCAGTTGCCTCCGCCGCCGCAAGCTGAGAATGACGCGCTGAAAGTGGCGGCTGGTGGCGTCTCCGAAATGGAGACCGATAAGGAAATGTCAGCTACTGTCCTAGAGGGTAACGATGCAGTCACCGGTCACATAATCTCAACCACAATTGGAGGCAAAAATGGTGAACCTAAACGGACCATCAGTTACATGGCTGAACGGGTTGTTGGCACTGGATCATTCGGAATTGTTTTCCAGGCAAAGTGCTTGGAGACTGGGGAGGCAGTGGCTATAAAGAAGGTCTTGCAGGACAAGCGGTACAAAAATCGTGAACTGCAGTTAATGCGCGTGATGGATCATCCAAATGTAGTTTCCCTGAAGCACTGTTTCTTCTCTACAACAAGCAAAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTCCCTGAGACGATGTACCGAGTTCTAAAGCACTACAATAGTATCAACCAGAGAATGCCCCTAATCTATGTGAAACTGTATACATATCAAATCTTTCGGGGATTAGCATATATCCATACTGTACCAGGAGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTGATCCTCTCACTCACCAAGTTAAACTTTGCGATTTTGGGAGTGCAAAAGTTCTGGTCAAGGGTGAATCAAACATTTCGTACATATGTTCACGATACTATCGGGCCCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTATTGATATCTGGTCAGCTGGTTGTGTCCTTGCGGAACTTCTTCTAGGCCAGCCATTGTTCCCAGGAGAAAATCAGGTGGACCAACTTGTGGAAATTATTAAGGTTCTTGGTACTCCGACTCGAGAAGAAATTCGTTGCATGAACCCTAATTATACAGATTTTAGATTCCCCCAGATTAAAGCTCATCCATGGCATAAGGTTTTTCACAAGCGAATGCCTCCTGAGGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCAAGTCTTCGTTGCAGTGCACTGGAAGCATTAGCACATCCTTTCTTTGACGAGCTTCGTGAGCCCAATGCCCGGCTACCCAATGGTCGTCCACTGCCTCCACTTTTCAACTTTAAACAGGAATTAGCTGGAGCACAACCTGAACTGATCTATAAGCTCATCCCAGAGCATGTCAGGCGGCTAACTGGTCTTGGCTTCCCATACCCGGCTAGCGCATAA 1287 0.4693 MASMPLGPHHHHQPPQPAALPLPPPSQLPPPPQAENDALKVAAGGVSEMETDKEMSATVLEGNDAVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGEAVAIKKVLQDKRYKNRELQLMRVMDHPNVVSLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYNSINQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCSALEALAHPFFDELREPNARLPNGRPLPPLFNFKQELAGAQPELIYKLIPEHVRRLTGLGFPYPASA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01095 428 MobiDBLite consensus disorder prediction 10 32 - -
Rops7g01095 428 CDD STKc_GSK3 83 375 IPR039192 -
Rops7g01095 428 FunFam Shaggy-related protein kinase kappa 168 415 - -
Rops7g01095 428 FunFam Glycogen synthase kinase-3 beta 72 167 - -
Rops7g01095 428 Gene3D Transferase(Phosphotransferase) domain 1 168 415 - -
Rops7g01095 428 MobiDBLite consensus disorder prediction 1 36 - -
Rops7g01095 428 Gene3D Phosphorylase Kinase; domain 1 73 167 - -
Rops7g01095 428 Pfam Protein kinase domain 88 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01095 428 ProSiteProfiles Protein kinase domain profile. 88 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01095 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Rops7g01095 428 ProSitePatterns Protein kinases ATP-binding region signature. 94 118 IPR017441 GO:0005524
Rops7g01095 428 SUPERFAMILY Protein kinase-like (PK-like) 87 396 IPR011009 -
Rops7g01095 428 SMART serkin_6 88 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01095 428 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 52 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01095 Rops-Chr7 14592994 14597899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01095 92 377 MAP Kinase Gene Family AT3G59790 36.700 3.64e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Rops7g01095 Pkinase 5.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01095 K14502 - qsu:111995841 749.199