Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01092 ATGGAGGAGGATGATGGGTACAGAAGGAAGGCCAATATTGCGCTTGTTGCCATTGTTCTACTTGCTTCACTCGCTGTGTTTGCTTCGCTGGTTGCCCTCGCTTACTACTGCTACATTCGCAACAAGGTCTCCAAGCGCCGCAAAAGTCAGAAAGTTGAAGATGCTAACCTTAATGAGAAAAGTGACTTTGCAAACCTGCAAGTTGTTGCTGAGAAAGGACTTCAGGTGTTCACTTTCAAGCAGCTGCATTCTGCTACAGGGGGCTTCAGCAAGTCAAATGTGATTGGTCATGGTGGATTTGGACTTGTTTACCGGGGAGTGCTCAATGATGGCAGGAAGGTTGCAATTAAATTCATGGATCAGGCAGGAAAGCAAGGAGAAGAAGAGTTTAAAGTTGAGGTGGAGTTGCTAAGTCGGTTGCATTCTCCATACTTGCTGGCATTGATTGGGTACTGCTCTGATAATAATCATAAACTGCTGGTGTATGAGTTTATGGCAAATGGTGGCCTGCAGGAACATCTTTATCCTGTCAGCAATTCCAATGTTACGCCCATGAAGTTGGATTGGGAAACTCGATTACGGGTAGCACTTGAAGCTGCTAAGGGTTTGGAATATCTTCATGAACATGTCAGTCCCCCAGTGATTCACAGAGATTTTAAGAGCAGCAACATCCTCTTGGATAAAAAATTTCATGCTAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAACTCGTGTTTTAGGCACCCAGGGATACGTTGCCCCTGAATATGCACTCACAGGGCATTTAACAACAAAATCAGATGTTTACAGTTATGGTGTTGTACTTTTGGAGCTGCTCACTGGCCGAGTGCCAGTTGATATGAAACGACCTTCAGGGGAAGGCGTTCTTGTTTCTTGGGCTTTACCCCTTTTGACTGATAGAGAAAAGGTTGGAAAGATTATGGATCCTGCATTGGAGGGACAGTACTCTATGAAAGAGGTTATCCAGGTAGCGGCGATTGCTGCAATGTGTGTGCAACCGGAGGCCGATTATCGGCCACTCATGGCAGATGTTGTGCAGTCATTGGTTCCATTGGTGAAGACTCACAGGTCCTCCTCAAAGGTAGGCAGCTCCTCTAGTTTCCATTCCCCTAAGTTGTCCCCCGCTTCAACATCCAGTTAA 1191 0.4576 MEEDDGYRRKANIALVAIVLLASLAVFASLVALAYYCYIRNKVSKRRKSQKVEDANLNEKSDFANLQVVAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGLVYRGVLNDGRKVAIKFMDQAGKQGEEEFKVEVELLSRLHSPYLLALIGYCSDNNHKLLVYEFMANGGLQEHLYPVSNSNVTPMKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGPDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPSGEGVLVSWALPLLTDREKVGKIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTHRSSSKVGSSSSFHSPKLSPASTSS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01092 396 SUPERFAMILY Protein kinase-like (PK-like) 71 365 IPR011009 -
Rops7g01092 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Rops7g01092 396 Pfam Protein kinase domain 90 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01092 396 CDD STKc_IRAK 95 368 - -
Rops7g01092 396 ProSiteProfiles Protein kinase domain profile. 89 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01092 396 MobiDBLite consensus disorder prediction 375 396 - -
Rops7g01092 396 PANTHER OS07G0668900 PROTEIN 53 375 - -
Rops7g01092 396 Gene3D Transferase(Phosphotransferase) domain 1 165 385 - -
Rops7g01092 396 FunFam Receptor-like serine/threonine-protein kinase ALE2 165 383 - -
Rops7g01092 396 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524
Rops7g01092 396 Gene3D Phosphorylase Kinase; domain 1 47 164 - -
Rops7g01092 396 FunFam Serine/threonine-protein kinase PBS1 55 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01092 Rops-Chr7 14562233 14566798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01092 1 393 Receptor kinase-like Gene Family AT3G58690 77.608 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Rops7g01092 Pkinase 8.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01092 - - gmx:100804893 696.812