Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01091 ATGTCAGGAGTTGGACCTCTCTCTCAGGATTGGGAACCCGTTGTGCTTCGCAAGAAAGCTCCCACCGCCTCCGCTAGGAAGGACGACAAGGCCGTCAACGCCGCTCGCCGTTCCGGCGCCGATATCGAAACCCTCAAGAAACATAATGCTGGGACAAACAAAGCTGCTTCTAGTAGCACTTCATTGAACACTAAGAGGCTGGATGATGATACAGAGAGTCTAGCTCATGATCGTGTACCAACTGAACTCAAAAAAGCTATAATGCAAGCCCGGACGGACAAGAAACTTACTCAGGCTCAACTTGCACAAATTATCAATGAGAAGCCTCAAGTGATCCAGGAGTACGAGTCTGGGAAAGCCATTCCAAACCAGCAGATAATTGGCAAATTAGAGAGGGCCCTTAGTGCCAAACTGCGTGGCAAGAAATGA 429 0.4918 MSGVGPLSQDWEPVVLRKKAPTASARKDDKAVNAARRSGADIETLKKHNAGTNKAASSSTSLNTKRLDDDTESLAHDRVPTELKKAIMQARTDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALSAKLRGKK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01091 142 CDD HTH_XRE 85 134 IPR001387 -
Rops7g01091 142 Gene3D - 71 142 IPR010982 GO:0003677
Rops7g01091 142 Pfam Helix-turn-helix 87 134 IPR001387 -
Rops7g01091 142 FunFam Multiprotein bridging factor 1 71 142 - -
Rops7g01091 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 9 142 - -
Rops7g01091 142 SMART mbf_short4 86 141 IPR001387 -
Rops7g01091 142 MobiDBLite consensus disorder prediction 1 77 - -
Rops7g01091 142 SUPERFAMILY lambda repressor-like DNA-binding domains 80 136 IPR010982 GO:0003677
Rops7g01091 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 134 IPR001387 -
Rops7g01091 142 MobiDBLite consensus disorder prediction 50 64 - -
Rops7g01091 142 MobiDBLite consensus disorder prediction 21 48 - -
Rops7g01091 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01091 Rops-Chr7 14540080 14543055 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Rops7g01091 MBF1 7.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01091 K03627 - gmx:100500420 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01091 7 14540080 14543055 Rops7g01091 7 14540080 14543055 ECH