Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01086 ATGTTGATGGTGGCTATTATGGAAGCAGTCAAGCAACAACTTCACATGAATAGTGAATTTTTTACTGATGATGGATTGTTATCTTCAAAGAGAGTTAAGGCTGTTTGTAAGCTTCATCTTCACCAATGGAAAAAAGGAGTGACTAAAAGAATCAATTTAACAGAAATGGCTGAGAGAATTTGCATATCTGATGAAGACAAGAGTGAAGGTAGCGGTATTCAAGGCAAACCCTCTTCACCAAGTCCCAGAAAACGTTCGTTCTTCGACTTGAATGAAGAAGCTGTGGATGAGGGAGATGATAATAGCATCAGTGGTGAGATAAGCAACAATGACATATCATCATCTCAAGAAGGTAATTTGAGTAGCAATAACTCTAGTGAAGGCTTGAAAGAGCATGCAACTACGGTTAGGCAATATGTGAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATTTAGCTTTTGTGCATGCTGTTGAGAGGCTTGGTGGGCAAGAAAGAGCAACGCCCAAGTTGGTTCTTCAGTTGATGAATGTGAGAGGACTTAGCATTTCACATGTGAAGAGTCATTTGCAGATGTATCGAAGTAAAAAGCTTGACGAGTCTGGTCAAGTTTTATCCCAAAATAGGACAATGCAAGGAAGGCATCATCTGTTGGATATGTACGGAAGACTTAATGCCCAAGGACACTTTGGGGTTGACAACAGGAACTATTTGCAGCCATCATCTCTACTAATGGAACAACCAAATGAAATCAAAGCTCATGGCTCTTCAAGATTTCACCCAACTGGGTTTTTCAATAGTCACATGATCATAAGATCAAGTTCAGGGTGGGACAATGATTTATATGAGGCAAACTCACATCTATTTGATGTAAGGGATGCAATAACAAGAAATGGACCTCTTAGATCAAGCCAAGTAAGCCAACTACTTGAAGAAAAAAAGTGGCCTCCTCATCAGGGAATTGCTGGATCACAAGGAAGTGATAAACACGAATCTATAAGCATATCTCGGGATGACAAGTATAGTACACAACCTTCTACATGGAGCACACGCTCTAGTTCTATCAATGATCAATATCAACGTAGTTCCTGCAGTCCTGTCTTCACTGGTCACGCGAAGTTTGATGATAAGGTTCATGATCGAATGCCAGAATTCACAAATCAGTTTCAAGTATCGGGGCAAAGCCATGTCAAAGCCCAATTAGAAAGGCTGAATGAGAAGAAACGGTCATCAAGTTTTCTTGAGCTAAAGCTAAGTCAAGATTCAGGAAATGTTAGAGACCAGATGAACATAAATTCAAAAAGTGAACAAGAAATCAACACCATACTTTCTCTTTAA 1347 0.4001 MLMVAIMEAVKQQLHMNSEFFTDDGLLSSKRVKAVCKLHLHQWKKGVTKRINLTEMAERICISDEDKSEGSGIQGKPSSPSPRKRSFFDLNEEAVDEGDDNSISGEISNNDISSSQEGNLSSNNSSEGLKEHATTVRQYVRSKMPRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVRGLSISHVKSHLQMYRSKKLDESGQVLSQNRTMQGRHHLLDMYGRLNAQGHFGVDNRNYLQPSSLLMEQPNEIKAHGSSRFHPTGFFNSHMIIRSSSGWDNDLYEANSHLFDVRDAITRNGPLRSSQVSQLLEEKKWPPHQGIAGSQGSDKHESISISRDDKYSTQPSTWSTRSSSINDQYQRSSCSPVFTGHAKFDDKVHDRMPEFTNQFQVSGQSHVKAQLERLNEKKRSSSFLELKLSQDSGNVRDQMNINSKSEQEINTILSL* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01086 448 MobiDBLite consensus disorder prediction 314 357 - -
Rops7g01086 448 FunFam Myb family transcription factor 143 201 - -
Rops7g01086 448 MobiDBLite consensus disorder prediction 65 133 - -
Rops7g01086 448 MobiDBLite consensus disorder prediction 341 357 - -
Rops7g01086 448 NCBIfam myb-like DNA-binding domain, SHAQKYF class 145 200 IPR006447 GO:0003677
Rops7g01086 448 Gene3D - 144 201 - -
Rops7g01086 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 201 IPR017930 -
Rops7g01086 448 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 122 260 IPR046955 GO:0003700
Rops7g01086 448 MobiDBLite consensus disorder prediction 102 132 - -
Rops7g01086 448 SUPERFAMILY Homeodomain-like 143 199 IPR009057 -
Rops7g01086 448 Pfam Myb-like DNA-binding domain 147 197 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01086 Rops-Chr7 14450960 14457410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01086 136 223 G2-like Transcription Factor Family AT2G42660 65.591 4.99e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops7g01086 Myb_DNA-binding 5.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01086 - - lang:109337615 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01086 7 14450960 14457410 Rops7g01086 7 14450960 14457410 ECH