Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01048 ATGGACTTCTTCCCTCTAACATTCCCTTTGGTAGCTGGGGATACACATATTTATAAAAGGGATGAGTTAGAGGCTCGATGGTTTCATTTCTTCTCTCTCATTGACACATCCTTGGGGTTGGGAGGTATATGCATATATGCAATATGCAATGAGCATAGATATATAACATTTGTTAAGGATACAACTACAACAACAACAACAACTTACCCAAGGTTTGTTGTGTTGGTTCTCTCTTTGTTCCATCTTCTTGTTCTAGTTGTGTTTTATCTTTATCAAATGGCACAATTACCTCCAAAGATCCCAAACATGTCACCAAGTTGGCCAGATTTCTCATCTCACCAGAAAATGCCATCATCTCTTGCAAGCATGTCACCACCAAACATTGGCAATGGCAACAACACAAACCATTACCACAATCAAAACCCTTCTTGGGTGGATGAGTTTCTTGACTTCTCCTCCGCAAGGCGCGGTGCTCACCGCCGGTCGGTGAGTGATTCCATCACCTTCTTGGAGGCACCAATGCTTGAAGATTGTCGTGGAAAACATGGGAATGACAATGAGTTTGACAAGTTTGATGATGAACAATTCATGTCCATGTTCTCAGATGAAATCTCTGGGGTCCACATGCCACCACCACCAACCTTGTCTTCTTCTAACCCTTCAAGCCCTTCGGATCAGAACTTCAAGCAGGAGGAGAAGGAGGTGGTGGAGGTGCCGAAGAAGGAGAAGGAGGAAGAAGAGAACCAGCCACAAATGAAAAATGAATCAGATGAGGTTGAAAGCCAATGCAAACAGGAAATTCCACAGCCTCCAAATAACTCCAATACCACTTCTTACAATGACAGAATTACTGACCCCAAGAGAGTCAAAAGAATCTTGGCAAACAGGCAATCTGCACAGAGATCGCGAGTGAGGAAGTTGCAATACATATCGGAGCTTGAACGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTGCTGTCTCCACGGGTTGCATTTTTAGATCATCAACGCTTGCTTCTAAATGTTGACAACAGTGCTCTCAAGCAAAGAATCGCTGCTCTTGCCCAAGACAAGATCTTTAAAGATGCTCAATCAAGAGGCACTGAAGGAGATAGAGAGGTTGAGACAAGTGTATCACCAACAAAACCTCAAGAAGATGGAAAATGCATCAGGGTCACCCTTACCATCCCCATCACCAAAACCAATATGTGA 1215 0.4346 MDFFPLTFPLVAGDTHIYKRDELEARWFHFFSLIDTSLGLGGICIYAICNEHRYITFVKDTTTTTTTTYPRFVVLVLSLFHLLVLVVFYLYQMAQLPPKIPNMSPSWPDFSSHQKMPSSLASMSPPNIGNGNNTNHYHNQNPSWVDEFLDFSSARRGAHRRSVSDSITFLEAPMLEDCRGKHGNDNEFDKFDDEQFMSMFSDEISGVHMPPPPTLSSSNPSSPSDQNFKQEEKEVVEVPKKEKEEEENQPQMKNESDEVESQCKQEIPQPPNNSNTTSYNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAQSRGTEGDREVETSVSPTKPQEDGKCIRVTLTIPITKTNM* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01048 404 FunFam Basic leucine zipper 61 286 359 - -
Rops7g01048 404 CDD bZIP_plant_RF2 288 338 IPR044759 GO:0003700|GO:0006355
Rops7g01048 404 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 290 305 IPR004827 GO:0003700|GO:0006355
Rops7g01048 404 MobiDBLite consensus disorder prediction 365 380 - -
Rops7g01048 404 PANTHER BASIC LEUCINE ZIPPER 34 93 366 - -
Rops7g01048 404 MobiDBLite consensus disorder prediction 203 287 - -
Rops7g01048 404 MobiDBLite consensus disorder prediction 227 262 - -
Rops7g01048 404 Gene3D - 286 358 - -
Rops7g01048 404 MobiDBLite consensus disorder prediction 365 386 - -
Rops7g01048 404 Pfam bZIP transcription factor 287 331 IPR004827 GO:0003700|GO:0006355
Rops7g01048 404 SUPERFAMILY Leucine zipper domain 287 341 IPR046347 GO:0003700|GO:0006355
Rops7g01048 404 MobiDBLite consensus disorder prediction 263 282 - -
Rops7g01048 404 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 285 337 IPR004827 GO:0003700|GO:0006355
Rops7g01048 404 SMART brlzneu 283 347 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01048 Rops-Chr7 13886940 13890743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01048 93 364 bZIP Transcription Factor Family AT3G58120 58.305 2.21e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops7g01048 bZIP_1 4.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01048 - - gmx:100815433 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01048 7 13886940 13890743 Rops7g01048 7 13886940 13890743 ECH