Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01036 ATGACTCAGTGCAGTTACCCTGAAAACAATCATAGCATCATTGTGGAGAGGAGGAAAGATAGCTTAATCAGAACATGTCCTACATGTGGGCATCATATCAAATGCCAAGAGCAGGCTGCTGGAATTCATGACTTACCTGGACTACCTGCTGGAGTGAAGTTTGATCCTACTGATCAGGAGATTCTTGAACATTTGGAAGCGAAGGTGCGGTCTGATATTCACAAGCTTCATCCCTTAATTGATGAGTTCATCCCTACTCTTGAAGGCGAAAATGGAATCTGCTGTACTCATCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGCCTGATCAGGCATTTCTTTCACCGGCCTTCCAAAGCATACACCACAGGAACAAGGAAAAGGAGAAAGGTGCACACAGATGCTGATGGCAGTGAGACCAGGTGGCACAAAACAGGCAAGACTAGGCCAGTCTATATCAGTGGCAAGTTGAAAGGGTACAAGAAAATTCTCGTGCTTTACACTAACTATAGAAAGCAAAGAAAGCCAGAGAAAACAAATTGGGTCATGCATCAGTACCACCTTGGCAATAATGAAGAGGAGAAGGAAGGGGAGTTGGTAGTCTCCAAAGTTTTCTATCAAACACAACCTAGACAATGTGGCTCATTGGTAAAAGACTCGTTTCCTGCAAAACTAAATGGTCAAGGCGTGCATGAGGTAGCTAATCATAAAAACAGTGGGTTTGTTGAGTACTACAATACTTCTTTCATATCCTTTGATCAAGGGGACCAACATAGATCTAGCAATGCTCAAGTAATTTCACATTTTCCTGTCCATGATGGTGCTCCTTTCATTCCTTGA 840 0.431 MTQCSYPENNHSIIVERRKDSLIRTCPTCGHHIKCQEQAAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVYISGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLVKDSFPAKLNGQGVHEVANHKNSGFVEYYNTSFISFDQGDQHRSSNAQVISHFPVHDGAPFIP* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01036 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 20 237 IPR044799 GO:0003700
Rops7g01036 279 MobiDBLite consensus disorder prediction 121 143 - -
Rops7g01036 279 SUPERFAMILY NAC domain 43 207 IPR036093 GO:0003677|GO:0006355
Rops7g01036 279 ProSiteProfiles NAC domain profile. 48 207 IPR003441 GO:0003677|GO:0006355
Rops7g01036 279 FunFam NAC domain-containing protein 73 57 211 - -
Rops7g01036 279 Pfam No apical meristem (NAM) protein 49 188 IPR003441 GO:0003677|GO:0006355
Rops7g01036 279 Gene3D NAC domain 57 211 IPR036093 GO:0003677|GO:0006355
Rops7g01036 279 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01036 Rops-Chr7 13762617 13764829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01036 24 279 NAC Transcription Factor Family AT4G28500 64.286 1.09e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Rops7g01036 NAM 3.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01036 - - gmx:100791648 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01036 7 13762617 13764829 Rops7g01036 7 13762617 13764829 ECH