Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01035 ATGGTGAATCTCTTCCTCTTCCTGCTTCTCCTCCTCTCTGTTTCTTCTCCTCCAACTCTCTCTCTCAACCAAGAGGGTCTCTTCCTTCTTCAAACCAATTTTCAATTACCCGATTGGAACCCCCGCGACCCCACCCCATGCAACTGGACCGGCATTTTCTGCCACCCCGTCACCGGCGCCGTCACCGCCGTCAACCTTTCCGACTCCCAACTCTCCGGTCCATTCCCAAATTCCCTCTGCCGCCTCCCTTCTCTCTCCTCTCTTTCTCTCTCTAACAACAACCTTAACTCCTCCCTCTCCGCCACCACCCTCGCCGCCTGCACCGCCCTCCGCTACCTCGACCTCTCCCAAAACCTCTTCTCCGGTCCCATCCCCGACACGCTTCCCCAACTCCCCTTTCTCAACCAGCTCAATCTCTCCTCAAACAACTTCTCCGGCCACATTCCGGCTACCTTTGGCCACTTCCGGCAACTCGAATCCCTCTCCCTCTTTAACAACCTCCTCACCGGAACCATACCCTCTTCTCTAAGCAACGTTTCCACCTTGAAATACCTTCACCTCGCTTACAACTACAACCTCTTCTCGGGTCCAATTCCAAGCTCGTTTGGGAATCTAACCAACCTCGAGGAACTATGGCTTGCAGGGTGCAACCTTGTGGGTCCCATTCCGAGTTCTCTTGGAAGGCTCCAGAAGCTTCGGAGCCTTGACTTGTCACTGAACAAACTCACCGGGAACATTCCAGAACAAATGGTGGAAGGGTTGCACAGTATCGTGCAAATCGAGCTTTATCAGAACCTTCTCTCCGGCGAGTTGCCACGTGGCGGAATCGCCAACCTGACTCGGTTGGAAGGATTCGATGCCTCGGACAACCAGTTAACTGGGCCGATTCCTGAAGAGTTATGTGGGTTGAAGAACCTCGGTTCTTTGAACTTGTACCTTAATCGCCTCGAAGGTTCTTTGCCGGAAAACATAGCAGTTTCGGAGAATTTGTATGAACTCTTGTTGTTCAATAACTCGCTCTCTGGGAGATTGCCGAGTGCTCTGGGAAGCAATTCAAGGTTGGAGATACTCGATGTTTCGTTTAATCAATTTTCCGGCGAGATTCCGGCGAATCTGTGCCGGCAGGGAGGGTTGGAGGAGCTGCTTCTTCTTTATAATTCATTTTCCGGGGAAATCCCTGAGAGTCTTGGGAACTGTAAGAGCTTAACGAGGGTCAGGCTTGGGAACAATAACCTTTCTGGGGTTGTTCCTGATGGTGTGTGGGGTCTACCCCATGTGTATCTTTTGGAGCTTGCAGAAAATTCTCTTTCTGGGTCAATTTCTAATGCGATTTCAGGTGCTAATAATCTGTCAATGTTGTTACTTTCGAGGAACAAGTTTTCTGGGTCGATTCCTGAGGCAATTGGGTCGTTGAATAATCTTGGGGAGTTTGTTGCAAGCCATAATATTCTTACTGGTCCCATTCCCACCAGTATGATCAAGCTGAGCCAGTTGGGTAGGCTTGTTCTTACCGATAATCAACTTTCTGGAGAAATTCCTCAAGGTGTTGGTGAGTGGAAGAAGCTCAATGAGCTTGATTTGGCAAATAATAGGCTTGATGGTAATATTCCAAATGAATTAGGAACCTTGCCGGGGCTTAATTTTCTTGATCTTTCTAACAATTGCTTTTCTGGTGAAATTCCAATGGAGCTGCAAAATTTGAAGCTTGATTTCCTGAATTTGTCAAATAACCAGCTTTCTGGGAAAATCCCTCCTCTTTATGCCAATAAGAATTATAGGGAGAGTTTTCTAGGTAATACAGGCCTCTTTATGCAAAATTCCAAGGGAGTATGTCCCAGCTTGGGTGAGAGTAAGAACAGGAAGTACGTCTGGATTTTCTGGTTCATATTTGTACTAGCTGGGGTTGTGTTAATTGTTGGGGTGGCCTGGTTTTACTTCAAATTCCGGAATTTCAAGAAGATGAAAAATGGGTTTAAGGTGTCAAAGTGGAGGTCATTTCATAAGTTGGGCTTCAGTGAGTTTGAGATTGTTAAATTGATGAGTGAAGACAATGTAATAGGGAGTGGATCTTCTGGGAAGGTCTACAAAGTGGTCCTGAGTAATGGGGAGGTGGTGGCAGTGAAGAAATTGGGAGTCAGCCAAGGGGCAGAATCCATGTCTGTGATTGCTGGATCTTATGGTTACATTGCACCAGAATATGCCTACACTCTTCGGGTGAACGAAAAGAGTGATATTTATAGCTTTGGTGTGGTCCTTTTGGAGTTGGTAACTGGGAAACCCCCTCTTGATCCTGAGTATGGGGAAAAAGATTTGGTAAAATGGGTTTCCTCTACACTGGATCAGGAAGGACATGATCAAGTGGTTGATCCCACTCTTGATCTTAAATACAGGGAAGAAATCATCAAGATACTTAGTGTGGGGCTTGTTTGTACCAGCTCTCTTCCTATAAGCCGCCCTTCAATGCGTAGAGTGGTGAAAATGCTGCAAGAAGTAACTGCAGTTCCCAAATCAAGAAGTGGAAAACTCTCTCCTTACTATCAAGAAGAAGCCTCAGATAATGATCATCAGGGAACCATAGTTTGA 2583 0.4677 MVNLFLFLLLLLSVSSPPTLSLNQEGLFLLQTNFQLPDWNPRDPTPCNWTGIFCHPVTGAVTAVNLSDSQLSGPFPNSLCRLPSLSSLSLSNNNLNSSLSATTLAACTALRYLDLSQNLFSGPIPDTLPQLPFLNQLNLSSNNFSGHIPATFGHFRQLESLSLFNNLLTGTIPSSLSNVSTLKYLHLAYNYNLFSGPIPSSFGNLTNLEELWLAGCNLVGPIPSSLGRLQKLRSLDLSLNKLTGNIPEQMVEGLHSIVQIELYQNLLSGELPRGGIANLTRLEGFDASDNQLTGPIPEELCGLKNLGSLNLYLNRLEGSLPENIAVSENLYELLLFNNSLSGRLPSALGSNSRLEILDVSFNQFSGEIPANLCRQGGLEELLLLYNSFSGEIPESLGNCKSLTRVRLGNNNLSGVVPDGVWGLPHVYLLELAENSLSGSISNAISGANNLSMLLLSRNKFSGSIPEAIGSLNNLGEFVASHNILTGPIPTSMIKLSQLGRLVLTDNQLSGEIPQGVGEWKKLNELDLANNRLDGNIPNELGTLPGLNFLDLSNNCFSGEIPMELQNLKLDFLNLSNNQLSGKIPPLYANKNYRESFLGNTGLFMQNSKGVCPSLGESKNRKYVWIFWFIFVLAGVVLIVGVAWFYFKFRNFKKMKNGFKVSKWRSFHKLGFSEFEIVKLMSEDNVIGSGSSGKVYKVVLSNGEVVAVKKLGVSQGAESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVLLELVTGKPPLDPEYGEKDLVKWVSSTLDQEGHDQVVDPTLDLKYREEIIKILSVGLVCTSSLPISRPSMRRVVKMLQEVTAVPKSRSGKLSPYYQEEASDNDHQGTIV* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01035 860 SMART serkin_6 680 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01035 860 Gene3D Transferase(Phosphotransferase) domain 1 673 845 - -
Rops7g01035 860 SUPERFAMILY L domain-like 30 369 - -
Rops7g01035 860 Gene3D Ribonuclease Inhibitor 187 252 IPR032675 -
Rops7g01035 860 Gene3D Ribonuclease Inhibitor 253 327 IPR032675 -
Rops7g01035 860 FunFam Receptor-like protein kinase HSL1 305 612 - -
Rops7g01035 860 SUPERFAMILY Protein kinase-like (PK-like) 717 836 IPR011009 -
Rops7g01035 860 Gene3D Ribonuclease Inhibitor 328 613 IPR032675 -
Rops7g01035 860 Gene3D Ribonuclease Inhibitor 22 175 IPR032675 -
Rops7g01035 860 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 717 830 - -
Rops7g01035 860 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Rops7g01035 860 SUPERFAMILY Protein kinase-like (PK-like) 680 711 IPR011009 -
Rops7g01035 860 MobiDBLite consensus disorder prediction 839 860 - -
Rops7g01035 860 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 23 179 - -
Rops7g01035 860 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 190 271 - -
Rops7g01035 860 SMART LRR_typ_2 155 179 IPR003591 -
Rops7g01035 860 SMART LRR_typ_2 495 519 IPR003591 -
Rops7g01035 860 SMART LRR_typ_2 229 253 IPR003591 -
Rops7g01035 860 SMART LRR_typ_2 131 154 IPR003591 -
Rops7g01035 860 SMART LRR_typ_2 303 327 IPR003591 -
Rops7g01035 860 SMART LRR_typ_2 82 106 IPR003591 -
Rops7g01035 860 SMART LRR_typ_2 352 375 IPR003591 -
Rops7g01035 860 Pfam Leucine rich repeat 401 460 IPR001611 GO:0005515
Rops7g01035 860 Pfam Protein kinase domain 716 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops7g01035 860 MobiDBLite consensus disorder prediction 844 860 - -
Rops7g01035 860 ProSiteProfiles Leucine-rich repeat profile. 568 590 IPR001611 GO:0005515
Rops7g01035 860 SUPERFAMILY RNI-like 275 585 - -
Rops7g01035 860 Pfam Leucine rich repeat N-terminal domain 36 54 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01035 Rops-Chr7 13753111 13756565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01035 663 860 Receptor kinase-like Gene Family AT1G28440 52.804 3.53e-55 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops7g01035 Pkinase 9.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01035 - - gmx:100778128 892.878