Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01033 ATGTTCAGATACACCATCAAAACAACTAGTTGGGAATTCTCGAACGTTCGACAGCAATCTCAAACCTCCAGAACATCTTTTGAACACCAAAGAAAAGAAGGAGAACCTGAAAGGGTGGAGAGACAGAACAAGAGAAAGAGAGAAGCACCAAATATGGGTGTTGACTATTATAAGGTTTTACAGGTAGATAGAAACGCAAAGGACGATGACCTGAAGAAAGCTTATAGGAAACTTGCCATGAAATGGCACCCCGACAAGAACCCCAACAACAAAAAAGATGCTGAATCTAAATTCAAACAAATCTCAGAAGCCTATGAGGTTCTGAGTGATCCTCAGAAGAGAGCTGTTTACGATCAATATGGTGAAGAAGGTTTGAAGGGACAGGTTCCACCACCTGATGCTTCTTCTAGTGGTGGTGGTGGTGGAACCACTTTCTATACCGCCGGTGATATTCCGACATCATTTCGGTTCAATCCTCGGAATGCAGATGACATTTTTGCGGAATTCTTTGGATTCTCGACTCCCTTTGGAGGCATGGGAGGGATGGGAAGAGGTGGTGGCAGCAGTGGCATGAGATCGAGGTTCTCCAATGGGATGTTTGGAGATGAAATTTTTGAATCTTTCCGTGAAGGAGGAGGGGTACATGTGAATCAAGGTGCTCCTCGTAAGGCTCCTCCCATTGAGAACAGGTTGCCCTGCACTCTTGAGGAGATATACAAAGGGACCTCAAAGAAGATGAAGATCTCTAGAGAAATTGTTGACGCCAGTGGCAAAACCATGCAGGTGGAGGAGATATTGACGATCAATGTTAAGCCTGGATGGAAGAAGGGGACGAAGATCACTTTCCCTGAAAAGGGGAATGGGCAACCAAATGTCACACCTGCAGACCTGGTGTTCATCATCGATGAAAAACCACATGGTGTCTTCAGTCGAGATGGGAATGATCTGATCGTCACTCAAAAGATTTCTCTTGCAGAAGCCTTAACTGGCTATACGGTCAACCTCACTACATTGGATGGTAGAAACTTAACCATACCAATCAACAATGTTATCCATCCTGATTATGAGGAGGTCGTTGCGAGAGAAGGAATGCCACTCCCAAAAGATCCAACCAAGAAGGGAAACTTAAGGATAAAGTTCAACATCAAGTTCCCAACCCGGCTCTCTGCTGACCAGAAGGCAGGAATCAAGAAACTCTTGGCTGCCTAA 1209 0.45 MFRYTIKTTSWEFSNVRQQSQTSRTSFEHQRKEGEPERVERQNKRKREAPNMGVDYYKVLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAESKFKQISEAYEVLSDPQKRAVYDQYGEEGLKGQVPPPDASSSGGGGGTTFYTAGDIPTSFRFNPRNADDIFAEFFGFSTPFGGMGGMGRGGGSSGMRSRFSNGMFGDEIFESFREGGGVHVNQGAPRKAPPIENRLPCTLEEIYKGTSKKMKISREIVDASGKTMQVEEILTINVKPGWKKGTKITFPEKGNGQPNVTPADLVFIIDEKPHGVFSRDGNDLIVTQKISLAEALTGYTVNLTTLDGRNLTIPINNVIHPDYEEVVAREGMPLPKDPTKKGNLRIKFNIKFPTRLSADQKAGIKKLLAA* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01033 402 FunFam DnaJ subfamily B member 13 306 386 - -
Rops7g01033 402 SUPERFAMILY Chaperone J-domain 54 178 IPR036869 -
Rops7g01033 402 Gene3D - 306 386 - -
Rops7g01033 402 SUPERFAMILY HSP40/DnaJ peptide-binding domain 308 394 IPR008971 GO:0006457|GO:0051082
Rops7g01033 402 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 52 400 - -
Rops7g01033 402 ProSiteProfiles dnaJ domain profile. 55 121 IPR001623 -
Rops7g01033 402 Gene3D - 226 304 - -
Rops7g01033 402 CDD DnaJ 55 110 IPR001623 -
Rops7g01033 402 MobiDBLite consensus disorder prediction 26 52 - -
Rops7g01033 402 FunFam DnaJ subfamily B member 13 54 180 - -
Rops7g01033 402 SUPERFAMILY HSP40/DnaJ peptide-binding domain 226 306 IPR008971 GO:0006457|GO:0051082
Rops7g01033 402 PRINTS DnaJ domain signature 75 90 IPR001623 -
Rops7g01033 402 PRINTS DnaJ domain signature 113 132 IPR001623 -
Rops7g01033 402 PRINTS DnaJ domain signature 93 113 IPR001623 -
Rops7g01033 402 PRINTS DnaJ domain signature 57 75 IPR001623 -
Rops7g01033 402 Gene3D DnaJ domain 53 183 IPR036869 -
Rops7g01033 402 Pfam DnaJ C terminal domain 227 385 IPR002939 -
Rops7g01033 402 SMART dnaj_3 54 113 IPR001623 -
Rops7g01033 402 MobiDBLite consensus disorder prediction 14 52 - -
Rops7g01033 402 Pfam DnaJ domain 55 118 IPR001623 -
Rops7g01033 402 CDD DnaJ_C 225 388 - -
Rops7g01033 402 FunFam Dnaj homolog subfamily b member 223 304 - -
Rops7g01033 402 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Rops7g01033 402 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01033 Rops-Chr7 13686995 13690235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01033 56 120 C2H2 Transcription Factor Family AT1G74250 37.681 2.77e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01033 K09510 - gmx:100778672 604.749