Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01030 ATGGGTGTTGACTATTACAAGGTTTTACAGGTAGATAGAAACGCAAAGGACGATGACCTGAAGAAATCTTATAGGAAACTCGCCATGAAATGGCACCCCGATAAGAACCCCAACAACAAAAAAGATGCTGAATCGAAATTTAAACAAATCTCAGAAGCTTATGAGGTTCTGAGTGATCCTCAAAAGAGAGCTATCTATGATCAATATGGGGAAGAGGGTTTGAAGGGTCAGGTTCCACCACCTGATGCTTCTTCTAGTGGTGGTGGTGGAACCACTTTCTGTACTACCGGTGACATTCCGACATCATTTCGTTTCAATCCTCTATACACTGATGACATTTTTGCAGAATTATTTGGGTTCTCGATTCCCTTTGGAGGCATGGGTTAG 387 0.4212 MGVDYYKVLQVDRNAKDDDLKKSYRKLAMKWHPDKNPNNKKDAESKFKQISEAYEVLSDPQKRAIYDQYGEEGLKGQVPPPDASSSGGGGTTFCTTGDIPTSFRFNPLYTDDIFAELFGFSIPFGGMG* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01030 128 PANTHER DNAJ HOMOLOG SUBFAMILY B 4 112 - -
Rops7g01030 128 MobiDBLite consensus disorder prediction 70 93 - -
Rops7g01030 128 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Rops7g01030 128 SMART dnaj_3 3 62 IPR001623 -
Rops7g01030 128 PRINTS DnaJ domain signature 42 62 IPR001623 -
Rops7g01030 128 PRINTS DnaJ domain signature 6 24 IPR001623 -
Rops7g01030 128 PRINTS DnaJ domain signature 24 39 IPR001623 -
Rops7g01030 128 PRINTS DnaJ domain signature 62 81 IPR001623 -
Rops7g01030 128 CDD DnaJ 4 59 IPR001623 -
Rops7g01030 128 Gene3D DnaJ domain 3 125 IPR036869 -
Rops7g01030 128 Pfam DnaJ domain 4 67 IPR001623 -
Rops7g01030 128 FunFam DnaJ subfamily B member 13 3 128 - -
Rops7g01030 128 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Rops7g01030 128 SUPERFAMILY Chaperone J-domain 3 87 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01030 Rops-Chr7 13673082 13673594 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01030 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 2.07e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01030 K09510 - gmx:100778672 227.254