Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01019 ATGAAGCGTTATGTTTACATCGATGATGATGAATCATCTCATGATTTCTACTGTGATAATCGTGTGTCAAACCGAAAATATACTGTATTGAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCCGGTTCATGAATCAGTACTTTTTGCTGATAGCTTGCCTGCAGCTATGGCCTCTCATTACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTTATTTTTGCAGTCTCTGCATCAAAAGAGGCATGGGATGATTACAATAGATATCTTTCAGACAAAATGGCAAATGAGAAGGAAGTATGGGTTGTCAGGAAGGGCATCAAGAAACATATCCAAGCCCAGGATATTCATGTAGGTAATATAGTATGGCTACGTGAAAATGACGAAGTGCCTTGTGACCTTGTTTTGATTGGCACCTCTGATCCTCAAGGAGTTTGCTATGTAGAGACTGCAGCACTTGATGGTGAAATTGATCTGAAGACACGAGTCATACCTTCTGCTTGCACGGGAATTGATGTTGAACTTTTGCACAAAATTAAGGGTGTAATTGAATGTCCTTGTCCAGATAAAGACATCAGAAGATTTGATGCAAACATGCGGTTGTACCCCCCTTTTATTGACAATGATATATGCCCTTTAACCATTAAAAACACAATGCTTCAGTCATGTTACCTGAGAAACACTGAGTGGGCATGTGGAGTGGCTGTGTATACAGGCAATGAAACCAAACAGGGGATGAGTAGAGGTATCCCAGAACCAAAGCTCACTGCCATGGATGCCATGATTGACAAGTTGACCGGTGCTATATTCATATTTCAAATCGTTGTTGTTATGGTTCTTGGCATAGCGGGTAATGTTTGGAAGGAAACAGAAGCCAAGAAACAATGGTATGTTCTTTACCCACATGAAGGCCCTTGGTATGAACTATTGATAATCCCTTTGCGGTTCAAGCTTCTTTGTTCCATCATGATACCCATTTCAATCAAGGTATCTCTGGATTTGGTGAAGAGCTTGTATGCAAAGTTTATTGACTGGGACCATCAAATGATTGACCTAGAAACCAGTGTTCCATCCCATGCAACAAATACAGCGATAAGCGAGGACCTGGGACAAGTGGAGTACATTTTGACTGACAAAACTGGCACCCTGACTGAGAATAAGATGATATTTAGAAGATGTTGTATTAGTGGCATTTTCTATGGAAATGAGAATGGAGATGCATTGAAAGATGTAGAGTTTCTCAATGCTGTTTCCAGTGGTTCTTCTGACGTTGTAAGGTTTCTTACAGTTATGGCGATATGTAATACTGTCGTACCTACGCGAAGCAAAACTGGAGATATCTTGTATAAGGCGCAGTCTCAGGATGAAGATGCTCTTGTTCATGCTGCTGCTCAGCTGAATATGGTTTTATTAAATAAGAATGGAAGCATTCTCGAAGTCAAGTTCAACTCTTCAATACTTCAGTATGAAGTCCTGGAAACCTTAGAGTTCACCTCTGATAGGAAAAGGATGTCAGTAGTGTTGAAAGATTGCCAAAATGGAAAGATTCTTCTCCTGTCGAAAGGAGCAGATGAGGCTATTCTCCCATATGCCCGTGCTGGGCAGCAAACCCGGCATTTCATTGAAGCTGTGGAGCAATATGCTCATTTGGGATTACGGACACTATGTTTGGCTTGGCGTGAGTTAAAGAAAGATGAATATCAAGAGTGGTCTTCAATGTTTAATGAGGCCAGTAGCACTTTGGTTGATAGGGAGTGGAGAGTAGCTGAGGTCTGCCAAAGAGTAGAACATGACTTGGAAATTCTTGGTGTCACGGCAATAGAGGACCGTTTACAGGATGGAGTTCCTGAAACAATAGAAACACTAAGAAAAGCTGGAATAAATTTTTGGATGCTAACAGGAGACAAGCAGAACACTGCAATACAAATTGCCCTGTCATGTAATTTTATTTCCCCAGAACCAAAGGGACAGCTTCTATTAATTGATGGCAAAACAGAGGATGAGGTTTGTAGAAGTTTAGAGAGAGTGCTTCGTACAATGCGGATAACTACCTCAGAACCCAAGGATGTGGCTTTTGTTGTTGATGGATGGGCTCTTGAGATTGCACTTAACCACTACCGTAAAGCTTTCACTGAGCTGGCAGTATTGTCAAGGACTGCCATATGTTGTCGTGTAACGCCATCACAAAAAGCACAGCTTGTTCAGATCTTAAAATCATGTGATTATAGAACATTGGCAATTGGTGATGGTGGGAATGATGTAAGGATGATTCAACAAGCTGATATTGGTGTGGGCATCAGTGGCAGAGAAGGATTGCAGGCAGCTAGAGCAGCTGATTACAGTATTGGAAAGTTTAGATTCCTGAAGAGATTAATTCTGGTCCATGGCCGGTATTCTTACAACCGCACAGCATTTCTCTCTCAATATTCATTCTATAAGTCCCTACTGATATGCTTCATCCAAATCTTTTTTTCATTTATTTCAGGTGTCTCTGGAACCAGCCTCTTCAATTCTCTTAGCTTGATGGCTTATAATGTTTTCTACACTAGTGTTCCTGTTCTAGTCAGTGTGCTTGACAAAGATCTTAGTGAGGAAACCGTGCTGCAGCATCCTCAAATTTTATTTTACTGCCAAGCGGGAAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGCAATAGTTGTATTTGCAATAAGCATACATGCCTATGCCTATGATAAAAGTGAAATGGAGGAGGTTTCAATGGTCGCACTTTCTGGTTGTATATGGTTGCAAGCTTTTGTCGTAACAATGGAGACCAATTCCTTTACGATATTGCAACATCTTGCTATATGGGGTAACTTGGCTGCCTTTTATATCATCAACTGGATCTTCAGTTCTCTTCCTTCATCAGGGATGTATACAATTATGTTTCGGTTATGTCGACAACCATCATATTGGATAACAATTTTTCTCATGGTTGCAGCCGGGATTGGTCCAATTCTAGCTATCAAGTACTTTCGATATACATACAGACCGAGCAAAATCAATACACTTCAGCAGGCTGAACGTCTAGGTGGGCCAATTTTGTCTCTTGGCACCATTGAGCCTCAGCTCAGATCTATAGAGAAAGATGTATCTACCTTGTCAATATCACAACCCCAAAACAGAAATCCTGTGTATGAACCTTTGTTATCAGATTCTCCAAATTCCACCAGAAGATCTTTTGGAGCTGGAACACCATTTGATTTTTTTCAGTCACAGTCAAGATTATCACTGTCTAGCTACACAAGAAATTGCAAGGACAACTGA 3321 0.4086 MKRYVYIDDDESSHDFYCDNRVSNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSASKEAWDDYNRYLSDKMANEKEVWVVRKGIKKHIQAQDIHVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGEIDLKTRVIPSACTGIDVELLHKIKGVIECPCPDKDIRRFDANMRLYPPFIDNDICPLTIKNTMLQSCYLRNTEWACGVAVYTGNETKQGMSRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVMVLGIAGNVWKETEAKKQWYVLYPHEGPWYELLIIPLRFKLLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSVPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNENGDALKDVEFLNAVSSGSSDVVRFLTVMAICNTVVPTRSKTGDILYKAQSQDEDALVHAAAQLNMVLLNKNGSILEVKFNSSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQTRHFIEAVEQYAHLGLRTLCLAWRELKKDEYQEWSSMFNEASSTLVDREWRVAEVCQRVEHDLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLLIDGKTEDEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALNHYRKAFTELAVLSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSLSLMAYNVFYTSVPVLVSVLDKDLSEETVLQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFAISIHAYAYDKSEMEEVSMVALSGCIWLQAFVVTMETNSFTILQHLAIWGNLAAFYIINWIFSSLPSSGMYTIMFRLCRQPSYWITIFLMVAAGIGPILAIKYFRYTYRPSKINTLQQAERLGGPILSLGTIEPQLRSIEKDVSTLSISQPQNRNPVYEPLLSDSPNSTRRSFGAGTPFDFFQSQSRLSLSSYTRNCKDN* 1107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01019 1106 Gene3D - 76 251 - -
Rops7g01019 1106 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 583 IPR023299 GO:0000166
Rops7g01019 1106 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Rops7g01019 1106 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Rops7g01019 1106 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Rops7g01019 1106 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 1016 IPR023298 -
Rops7g01019 1106 Gene3D - 447 590 IPR023299 GO:0000166
Rops7g01019 1106 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Rops7g01019 1106 CDD P-type_ATPase_APLT 19 906 - -
Rops7g01019 1106 MobiDBLite consensus disorder prediction 1056 1075 - -
Rops7g01019 1106 Pfam E1-E2 ATPase 100 290 - -
Rops7g01019 1106 SUPERFAMILY HAD-like 368 794 IPR036412 -
Rops7g01019 1106 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Rops7g01019 1106 FunFam Phospholipid-transporting ATPase 75 251 - -
Rops7g01019 1106 NCBIfam HAD-IC family P-type ATPase 717 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops7g01019 1106 Gene3D - 602 790 IPR023214 -
Rops7g01019 1106 SFLD p-type atpase 362 801 IPR044492 -
Rops7g01019 1106 FunFam Phospholipid-transporting ATPase 449 592 - -
Rops7g01019 1106 FunFam Phospholipid-transporting ATPase 602 789 - -
Rops7g01019 1106 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Rops7g01019 1106 NCBIfam phospholipid-translocating P-type ATPase 426 1023 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Rops7g01019 1106 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Rops7g01019 1106 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 8 1027 - -
Rops7g01019 1106 SFLD Haloacid Dehalogenase 362 801 - -
Rops7g01019 1106 Pfam Cation transport ATPase (P-type) 436 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01019 Rops-Chr7 13526510 13545425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01019 1 1106 Primary Pumps ATPases AT5G44240 84.734 0.0 1994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01019 K01530 - gmx:100778546 2100.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01019 7 13526510 13545425 Rops7g01019 7 13526510 13545425 ECH