Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00994 ATGGAGCAGCCTCTGCTGAAAGGCGAAAGCAGTGGTGGCCGGAGGGACCGCTCACGAGGGAGGGTCCGTCGCACCGACGCAATCGCCTACGGCTCTATATACGAGAAAGCCGCAGCACTCATCGATCTGGCTGAAGATGGTGTTGGTATACCTGAGCAGATTCTTGATTCATCAAACTTTCAAAGTTATGCAAGATTTTATTTTACGTTCACTAAATGCAATTTCATCTGGTCTCTCAGTTATTTTGCTTTGATAGCCCTGAATTTCCTGGAGAAACCTCTATGGTGTGAAAGGAATACCGCACATTCTTGCAAAGATAGAGAGTATTTCTTTTTGGGACAGTTGCCATATCTAACTGCTGCGGAATGTCTTATTTATGAGGGAATAGCTCTTATTTTGCTAATCATTCATACTTTCTTGCCATTATCATACGAAGGATCCCATATATATTGGAAAAGTTCCGTTAATCAATTGAAGGCCTTCTGTCTATTGGTTCTCATTGCTGATATGCTGGTTTATGCTCTTTATATGTTTACAATGGCTTTTGATTTACTACCTTTCAGAATTGCACCTTATATCAGGGTTGTTCTTTTCATTCTGAATATAAGGGAGCTACGGGAAACTATCATCATCTTGGCTGGAATGCTTGACACATACTTAAACATCTTGGCTTTGTGGCTTCTGTTTCTTGTTTTTGCAAGTTGGGTGGCTTATGTGATTTTTGAAGATACAATACAGGGGAAAACAGTGTTCACTTCCTATGGTACTACGTTATATCAGATGTTTCTTTTATTTACCACAGCCAATAGTCCAGATGTTTGGGTTCCTGCTTACAAGTCTTCGCGTTGGTATTGCCTGTTTTTCATTCTCTTTGTGCTGGTTGGAGTTTACTTTGTTACAAACTTGATCCTTGCTGTTGTTTATGAGAGTTTCAAGAGTGAGCTTGTAAAACAAGTTTCTGAGATGGATCGTATGAGAAGAACTATGTTGGATAAAGCTTTTGATCTCTTAGATAAATATAATGTTGGATATCTTAACAAAGATCAATGCATTAGGCTCTTTGAGGAGCTGAACAAGTACAGGACTTTGCCAAATATCTCCAAGGAAGAATTTGAGTTGATATTTGATGAGCTGGATGATAGTCATGATGTAAAGATCAACAAAGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAAATTCCAGAAGGAGGAAATTGTTTCTTACTTTGACTATTTAGCATTCTACCATTCGTCCACCTCAAAGAGATTGAAAGCCTTTGTGAAGAGCCCCATGTTTGGATACCTAGTGTCCTTCATTCTCATACTGAATCTGGTTGCTGTAATTATTGAGACAATGCTTGATATAAAAAACAGTTCTGCTCAAAAGGTGTGGCAAGTGGTTGAGTTCACTTTTGGGTGGATATACGTACTAGAAATGGCTCTAAAGGTTTATTCATATGGATTTATGAACTATTGGCAGGATGGTCAAAATCGCTTTGATTTTATTATCACGTTGATAATTGTCATTGGAGAAACTATAACTTTTGTTACACCTGATGATGCTTTACCTTTTATCACAAATGGTGAATGGATTCGTTACCTCCTCCTTGCAAGAATGTTGAGATTGATAAGGCTCCTAATGCATGTCCAGCGATACCGAGGCTTTGTGGCAACTTTCTTAACCCTTATACCAAGCTTGATGCCATACCTAGGGATCATATTTTGTGTTTTATGTTTTTATTGCTCACTTGGTGTACAGATTTTTGGTGGAATCGTTAATGCTGGAAACCCTGAACTGGAAGCAACTGCCCTTGCTGATAATGACTATTTGCTTTTTAATTTCAACGATTATCCAAACGGAATGGTTACACTTTTCAATATTCTAGTCACGGGGGTCTGGCAAGAATTGATGGAGAGCTACAAGGAATTAACTGGGACTTCTTGGACCTATCTGTACTTTATTAGCTTCTACTTAATTACTGTGTTGCTTCTTTTGAATTTGATTATTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTTGAGTCATCAGAAAATTGTGATGCAAATGACAAGGAAGTTGAAGGAGATAAACATCGAAGGCGGCGATCTGTTGGCACAAAAACAAGAAGCCAGAGGGCTGATGCTCTGCTTCATCATATGTTGAGTGCTGAGTTGTGTCAGAATCAGCCTTCCAATACATAA 2214 0.388 MEQPLLKGESSGGRRDRSRGRVRRTDAIAYGSIYEKAAALIDLAEDGVGIPEQILDSSNFQSYARFYFTFTKCNFIWSLSYFALIALNFLEKPLWCERNTAHSCKDREYFFLGQLPYLTAAECLIYEGIALILLIIHTFLPLSYEGSHIYWKSSVNQLKAFCLLVLIADMLVYALYMFTMAFDLLPFRIAPYIRVVLFILNIRELRETIIILAGMLDTYLNILALWLLFLVFASWVAYVIFEDTIQGKTVFTSYGTTLYQMFLLFTTANSPDVWVPAYKSSRWYCLFFILFVLVGVYFVTNLILAVVYESFKSELVKQVSEMDRMRRTMLDKAFDLLDKYNVGYLNKDQCIRLFEELNKYRTLPNISKEEFELIFDELDDSHDVKINKDEFADICNAIALKFQKEEIVSYFDYLAFYHSSTSKRLKAFVKSPMFGYLVSFILILNLVAVIIETMLDIKNSSAQKVWQVVEFTFGWIYVLEMALKVYSYGFMNYWQDGQNRFDFIITLIIVIGETITFVTPDDALPFITNGEWIRYLLLARMLRLIRLLMHVQRYRGFVATFLTLIPSLMPYLGIIFCVLCFYCSLGVQIFGGIVNAGNPELEATALADNDYLLFNFNDYPNGMVTLFNILVTGVWQELMESYKELTGTSWTYLYFISFYLITVLLLLNLIIAFVLEAFFAEMELESSENCDANDKEVEGDKHRRRRSVGTKTRSQRADALLHHMLSAELCQNQPSNT* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00994 737 MobiDBLite consensus disorder prediction 1 20 - -
Rops7g00994 737 SUPERFAMILY EF-hand 314 398 IPR011992 -
Rops7g00994 737 Gene3D - 312 395 - -
Rops7g00994 737 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 734 IPR044581 GO:0005245
Rops7g00994 737 Pfam Ion transport protein 133 313 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops7g00994 737 Pfam Ion transport protein 432 679 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops7g00994 737 FunFam Two pore calcium channel protein 1 558 716 - -
Rops7g00994 737 CDD EFh 329 394 IPR002048 GO:0005509
Rops7g00994 737 FunFam Two pore calcium channel protein 1 204 315 - -
Rops7g00994 737 FunFam Two pore calcium channel protein 1 424 557 - -
Rops7g00994 737 SUPERFAMILY Voltage-gated potassium channels 431 678 - -
Rops7g00994 737 Gene3D - 423 557 IPR027359 -
Rops7g00994 737 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Rops7g00994 737 MobiDBLite consensus disorder prediction 690 715 - -
Rops7g00994 737 Gene3D - 558 719 - -
Rops7g00994 737 Gene3D - 204 311 - -
Rops7g00994 737 MobiDBLite consensus disorder prediction 690 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00994 Rops-Chr7 13196369 13225224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00994 1 737 Ion Channels AT4G03560 65.989 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00994 K16900 - gmx:100806160 1229.93