Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00975 ATGTCTGCATCTAAGAACAGTGGCAAATTCCGCAAAGAAGTGGGTGATGAAACTCACAAAGTTACCCATATGGGTGAAAGCAAAGATTGGGAGATTGAAAAGGGAAAGGGTCTTGATTTAAGCTCTCAGAGGCGTCAACGGAAGCCAGTTTTTGATGACGCTTCCATGTTATGTAATAGGCCTCTCAAGAAAATTAGTAGCCCAGAACATCATAATTACACAAACCAACCTTCAATTTGCCTGCAACCTTCTCTTCCTTCTATTCCTCCTTCATCCTCTTCAAAACTTGTCTTTCCTTTTGCCTTTGATGCTTCACAACACCCCATGCAATTCCCACACCAATTTGGAACAACAAATTTACCTTTTCTCCGTCCTTCAATTCAAACAACTCAGCAGCAGCAGCAGCAAATGATATCCTTCGGGTCCCAACAACAGAACATGGCTTATCCACCAATCATAGCCAGAGATTCCACGGTGCTACAACAACAACAGCAACATCGCCAGCAGCTTCTTCAGTATTGGAGTGATGCCCTGAATTTAAGTCCAAGAGGAAGGATGATGATGATGATGAACAGCAGATTTGGACCAGATGGTAGGCCACTTTTTAGGCCTCCAATTCAACCTATAAACACTACCAAGCTCTATAGAGGAGTGAGGCAACGCCATTGGGGCAAATGGGTAGCTGAAATTCGTCTCCCTCGAAACAGAACACGTCTCTGGCTAGGCACATTTGACACAGCAGAAGATGCTGCCATGGCCTATGACCGTGAGGCATATAAGTTAAGAGGAGAGAATGCAAGGCTCAATTTCCCTGAGCTTTTTCTCAAAAAGGATAAAGAAACTACTTCTTCACCACCTCCAGCAACTACTTCATCTGCTTCTTCTCCTTCCAAACACAGCACCACGAAACAGCCTGAACCTGATGACTATCATGTGCAGCCACAGCCAACAGAAGAGTCTAATGAGAATGACTCCGGAATTGGATCGAGTGATGCTACGGTGAGTGATGAGGTTCAAGCAGTTGCTGAAGCAGGGGAAGGAGTTTCACAGTCACAGGAATTGGTTTGGGGAGAAATGTCAGCATGGTTCAATGCTATTCCAGCTGCTTGGGGTCCAGGTAGTCCTATGTGGGATGATTTGGATACCACCAATAACCTTTTTTTACATTCACAACTTCCTTTTGCTGCCAATCTCAATCAACAAGAATTCAATGATGTTGATCCTCAAAGACATCAAGATCATAACATGGGACCAGGTTCTTCCACAAGACCCTTCTTCTCCAAGGATCAGGATTGA 1296 0.4437 MSASKNSGKFRKEVGDETHKVTHMGESKDWEIEKGKGLDLSSQRRQRKPVFDDASMLCNRPLKKISSPEHHNYTNQPSICLQPSLPSIPPSSSSKLVFPFAFDASQHPMQFPHQFGTTNLPFLRPSIQTTQQQQQQMISFGSQQQNMAYPPIIARDSTVLQQQQQHRQQLLQYWSDALNLSPRGRMMMMMNSRFGPDGRPLFRPPIQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAYKLRGENARLNFPELFLKKDKETTSSPPPATTSSASSPSKHSTTKQPEPDDYHVQPQPTEESNENDSGIGSSDATVSDEVQAVAEAGEGVSQSQELVWGEMSAWFNAIPAAWGPGSPMWDDLDTTNNLFLHSQLPFAANLNQQEFNDVDPQRHQDHNMGPGSSTRPFFSKDQD* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00975 431 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 380 - -
Rops7g00975 431 MobiDBLite consensus disorder prediction 1 47 - -
Rops7g00975 431 MobiDBLite consensus disorder prediction 404 431 - -
Rops7g00975 431 Pfam AP2 domain 215 263 IPR001471 GO:0003700|GO:0006355
Rops7g00975 431 MobiDBLite consensus disorder prediction 282 301 - -
Rops7g00975 431 ProSiteProfiles AP2/ERF domain profile. 214 271 IPR001471 GO:0003700|GO:0006355
Rops7g00975 431 MobiDBLite consensus disorder prediction 9 47 - -
Rops7g00975 431 PRINTS Ethylene responsive element binding protein signature 215 226 IPR001471 GO:0003700|GO:0006355
Rops7g00975 431 PRINTS Ethylene responsive element binding protein signature 237 253 IPR001471 GO:0003700|GO:0006355
Rops7g00975 431 Gene3D AP2/ERF domain 214 272 IPR036955 GO:0003700|GO:0006355
Rops7g00975 431 MobiDBLite consensus disorder prediction 277 333 - -
Rops7g00975 431 FunFam Ethylene-responsive transcription factor 2 213 272 - -
Rops7g00975 431 MobiDBLite consensus disorder prediction 414 431 - -
Rops7g00975 431 MobiDBLite consensus disorder prediction 314 333 - -
Rops7g00975 431 SMART rav1_2 214 277 IPR001471 GO:0003700|GO:0006355
Rops7g00975 431 CDD AP2 213 273 IPR001471 GO:0003700|GO:0006355
Rops7g00975 431 SUPERFAMILY DNA-binding domain 214 272 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00975 Rops-Chr7 12974781 12977038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00975 1 379 AP2-EREBP Transcription Factor Family AT2G20880 43.045 2.67e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops7g00975 AP2 4.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00975 - - gmx:100809887 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00975 7 12974781 12977038 Rops7g00975 7 12974781 12977038 ECH